RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	SETDB2	Q96T68	719 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	RNF19A	Q9NV58	838 aa		10.51	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PNMA6F	A0A0J9YX94	578 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	TMC4	Q7Z404	712 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	KLRG1	Q96E93	195 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	SUSD3	Q96L08	255 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	GGNBP2	Q9H3C7	697 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	FAM13B	Q9NYF5	915 aa		10.5	□□□□□ -0.73
SMARCA2-238	ENST00000635273	TGFBR3L	H3BV60	316 aa		10.49	□□□□□ -0.73
SMARCA2-238	ENST00000635273	CAPN5	O15484	640 aa	Predicted RBP	10.49	□□□□□ -0.73
SMARCA2-238	ENST00000635273	DAB2	P98082	770 aa		10.49	□□□□□ -0.73
SMARCA2-238	ENST00000635273	DMGDH	Q9UI17	866 aa	Known RBP	10.49	□□□□□ -0.73
SMARCA2-238	ENST00000635273	OPLAH	O14841	1288 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	UPP2	O95045	317 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	TAT	P17735	454 aa	Predicted RBP	10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	POU4F2	Q12837	409 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	C8orf34	Q49A92	452 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	LDLRAD1	Q5T700	205 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ZNF280C	Q8ND82	737 aa		10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	GPC6	Q9Y625	555 aa	Predicted RBP	10.48	□□□□□ -0.73
SMARCA2-238	ENST00000635273	RPLP1	P05386	114 aa	Known RBP	10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ALG1L	Q6GMV1	187 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	NBPF10	Q6P3W6	841 aa	Known RBP	10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	TTC16	Q8NEE8	873 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PIK3R5	Q8WYR1	880 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	HSH2D	Q96JZ2	352 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	CSRNP1	Q96S65	589 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273	MRS2	Q9HD23	443 aa		10.47	□□□□□ -0.73
SMARCA2-238	ENST00000635273		A6NHS1	94 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273		H3BM21	787 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	SCAMP3	O14828	347 aa	Known RBP	10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PSMD2	Q13200	908 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	ORC1	Q13415	861 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	WDR44	Q5JSH3	913 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	IER5	Q5VY09	327 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	PRICKLE2	Q7Z3G6	844 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	RNF217	Q8TC41	542 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	USP35	Q9P2H5	1018 aa		10.46	□□□□□ -0.73
SMARCA2-238	ENST00000635273	LOC105371045	A0A1W2PR82	267 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	SORBS3	O60504	671 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	BMP2	P12643	396 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ATP4A	P20648	1035 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ITGAE	P38570	1179 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	IDH3A	P50213	366 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	CFHR5	Q9BXR6	569 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ANKIB1	Q9P2G1	1089 aa		10.45	□□□□□ -0.74
SMARCA2-238	ENST00000635273	EIF1AY	O14602	144 aa	Known RBP	10.44	□□□□□ -0.74
SMARCA2-238	ENST00000635273	C6orf118	Q5T5N4	469 aa		10.44	□□□□□ -0.74
SMARCA2-238	ENST00000635273	BICDL1	Q6ZP65	573 aa		10.44	□□□□□ -0.74
SMARCA2-238	ENST00000635273	LYSMD3	Q7Z3D4	306 aa		10.44	□□□□□ -0.74
SMARCA2-238	ENST00000635273	TMEM151A	Q8N4L1	468 aa		10.44	□□□□□ -0.74
SMARCA2-238	ENST00000635273	NEFL	P07196	543 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	INPP5B	P32019	993 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	HDLBP	Q00341	1268 aa	Known RBP	10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	TMEM87A	Q8NBN3	555 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	FBF1	Q8TES7	1133 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	C8orf37	Q96NL8	207 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ZIC5	Q96T25	663 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	DNAJC25	Q9H1X3	360 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	VTI1B	Q9UEU0	232 aa		10.43	□□□□□ -0.74
SMARCA2-238	ENST00000635273	GNA15	P30679	374 aa		10.42	□□□□□ -0.74
SMARCA2-238	ENST00000635273	MRPL14	Q6P1L8	145 aa	Known RBP	10.42	□□□□□ -0.74
SMARCA2-238	ENST00000635273	BTLA	Q7Z6A9	289 aa		10.42	□□□□□ -0.74
SMARCA2-238	ENST00000635273	NEUROD4	Q9HD90	331 aa		10.42	□□□□□ -0.74
SMARCA2-238	ENST00000635273	USP20	Q9Y2K6	914 aa		10.42	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ARSD	P51689	593 aa		10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273	C9orf131	Q5VYM1	1079 aa		10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273	LRRC69	Q6ZNQ3	347 aa		10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273	TIMMDC1	Q9NPL8	285 aa		10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273	RTCB	Q9Y3I0	505 aa	Known RBP	10.41	□□□□□ -0.74
SMARCA2-238	ENST00000635273		A0A1B0GTH6	734 aa		10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	RNF225	M0QZC1	329 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	RHOQ	P17081	205 aa		10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	MSX1	P28360	303 aa		10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ERCC5	P28715	1186 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	ZC3H6	P61129	1189 aa	Known RBP	10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	XKR5	Q6UX68	686 aa		10.4	□□□□□ -0.74
SMARCA2-238	ENST00000635273	CPNE3	O75131	537 aa	Known RBP	10.39	□□□□□ -0.75
SMARCA2-238	ENST00000635273	VEGFB	P49765	207 aa		10.39	□□□□□ -0.75
SMARCA2-238	ENST00000635273	FRMD6	Q96NE9	622 aa		10.39	□□□□□ -0.75
SMARCA2-238	ENST00000635273	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.39	□□□□□ -0.75
SMARCA2-238	ENST00000635273	ERBB4	Q15303	1308 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	TTLL8	A6PVC2	850 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	TNFRSF21	O75509	655 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	GDF11	O95390	407 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	TRIP4	Q15650	581 aa	Predicted RBP	10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	CMTR1	Q8N1G2	835 aa	Known RBP	10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	KCNMB2	Q9Y691	235 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273	AK5	Q9Y6K8	562 aa		10.38	□□□□□ -0.75
SMARCA2-238	ENST00000635273		A0A1W2PNR3	127 aa		10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	UBAP1L	F5GYI3	381 aa		10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	PDE12	Q6L8Q7	609 aa	Known RBP	10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	ZNF438	Q7Z4V0	828 aa		10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	METTL16	Q86W50	562 aa	Known RBP	10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	METTL5	Q9NRN9	209 aa	Known RBP	10.37	□□□□□ -0.75
SMARCA2-238	ENST00000635273	FIGNL2	A6NMB9	653 aa		10.36	□□□□□ -0.75
SMARCA2-238	ENST00000635273	FANCC	Q00597	558 aa		10.36	□□□□□ -0.75
SMARCA2-238	ENST00000635273	USPL1	Q5W0Q7	1092 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms