RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
LINC00339-208ENST00000634934 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
LINC00339-208ENST00000634934 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
LINC00339-208ENST00000634934 SCN7AQ01118 1682 aa18.21■□□□□ 0.51
LINC00339-208ENST00000634934 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
LINC00339-208ENST00000634934 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
LINC00339-208ENST00000634934 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
LINC00339-208ENST00000634934 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
LINC00339-208ENST00000634934 BCORQ6W2J9 1755 aa18.2■□□□□ 0.5
LINC00339-208ENST00000634934 TRIM28Q13263 835 aaKnown RBP18.19■□□□□ 0.5
LINC00339-208ENST00000634934 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
LINC00339-208ENST00000634934 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
LINC00339-208ENST00000634934 CCDC191Q8NCU4 936 aa18.19■□□□□ 0.5
LINC00339-208ENST00000634934 UBN2Q6ZU65 1347 aa18.19■□□□□ 0.5
LINC00339-208ENST00000634934 NUP98P52948 1817 aa18.19■□□□□ 0.5
LINC00339-208ENST00000634934 POLD1P28340 1107 aa18.18■□□□□ 0.5
LINC00339-208ENST00000634934 GCKRQ14397 625 aa18.18■□□□□ 0.5
LINC00339-208ENST00000634934 NFIXQ14938 502 aa18.18■□□□□ 0.5
LINC00339-208ENST00000634934 PARP10Q53GL7 1025 aa18.18■□□□□ 0.5
LINC00339-208ENST00000634934 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
LINC00339-208ENST00000634934 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
LINC00339-208ENST00000634934 MMP10P09238 476 aa18.17■□□□□ 0.5
LINC00339-208ENST00000634934 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
LINC00339-208ENST00000634934 JARID2Q92833 1246 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-208ENST00000634934 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
LINC00339-208ENST00000634934 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
LINC00339-208ENST00000634934 PPP1R42Q7Z4L9 355 aa18.16■□□□□ 0.5
LINC00339-208ENST00000634934 EXOC6Q8TAG9 804 aa18.16■□□□□ 0.5
LINC00339-208ENST00000634934 MEIS3Q99687 375 aa18.16■□□□□ 0.5
LINC00339-208ENST00000634934 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
LINC00339-208ENST00000634934 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
LINC00339-208ENST00000634934 GRM8O00222 908 aa18.15■□□□□ 0.5
LINC00339-208ENST00000634934 TM4SF1P30408 202 aa18.15■□□□□ 0.5
LINC00339-208ENST00000634934 NBPF5PQ86XG9 351 aaPredicted RBP18.15■□□□□ 0.5
LINC00339-208ENST00000634934 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
LINC00339-208ENST00000634934 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
LINC00339-208ENST00000634934 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-208ENST00000634934 NPHP1O15259 732 aa18.14■□□□□ 0.49
LINC00339-208ENST00000634934 UBE3BQ7Z3V4 1068 aa18.14■□□□□ 0.49
LINC00339-208ENST00000634934 FAM89AQ96GI7 184 aa18.14■□□□□ 0.49
LINC00339-208ENST00000634934 FHDC1Q9C0D6 1143 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-208ENST00000634934 CARMIL3Q8ND23 1372 aa18.14■□□□□ 0.49
LINC00339-208ENST00000634934 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.49
LINC00339-208ENST00000634934 GNAI3P08754 354 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 GTF2E1P29083 439 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 DDR1Q08345 913 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 AFDNP55196 1824 aaKnown RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 UTRNP46939 3433 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 H7C1W4 665 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 NTSR2O95665 410 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 PCCAP05165 728 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-208ENST00000634934 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 NYXQ9GZU5 481 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 PARP3Q9Y6F1 533 aa18.13■□□□□ 0.49
LINC00339-208ENST00000634934 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
LINC00339-208ENST00000634934 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
LINC00339-208ENST00000634934 POLRMTO00411 1230 aaKnown RBP18.12■□□□□ 0.49
LINC00339-208ENST00000634934 SERPINB2P05120 415 aa18.12■□□□□ 0.49
LINC00339-208ENST00000634934 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
LINC00339-208ENST00000634934 SYNE4Q8N205 404 aa18.12■□□□□ 0.49
LINC00339-208ENST00000634934 IBTKQ9P2D0 1353 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-208ENST00000634934 CNBD1Q8NA66 436 aa18.11■□□□□ 0.49
LINC00339-208ENST00000634934 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
LINC00339-208ENST00000634934 UTYO14607 1347 aa18.1■□□□□ 0.49
LINC00339-208ENST00000634934 ERFEQ4G0M1 354 aa18.1■□□□□ 0.49
LINC00339-208ENST00000634934 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
LINC00339-208ENST00000634934 SYT17Q9BSW7 474 aa18.1■□□□□ 0.49
LINC00339-208ENST00000634934 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
LINC00339-208ENST00000634934 IRS4O14654 1257 aaPredicted RBP18.09■□□□□ 0.49
LINC00339-208ENST00000634934 GNAI2P04899 355 aa18.09■□□□□ 0.49
LINC00339-208ENST00000634934 CASP7P55210 303 aa18.09■□□□□ 0.49
LINC00339-208ENST00000634934 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
LINC00339-208ENST00000634934 HDAC5Q9UQL6 1122 aa18.09■□□□□ 0.49
LINC00339-208ENST00000634934 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
LINC00339-208ENST00000634934 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.49
LINC00339-208ENST00000634934 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.49
LINC00339-208ENST00000634934 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.49
LINC00339-208ENST00000634934 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
LINC00339-208ENST00000634934 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.48
LINC00339-208ENST00000634934 ST5P78524 1137 aa18.08■□□□□ 0.48
LINC00339-208ENST00000634934 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
LINC00339-208ENST00000634934 HSP90B1P14625 803 aaKnown RBP18.06■□□□□ 0.48
LINC00339-208ENST00000634934 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
LINC00339-208ENST00000634934 ABCC12Q96J65 1359 aa18.06■□□□□ 0.48
LINC00339-208ENST00000634934 AAMPQ13685 434 aa18.05■□□□□ 0.48
LINC00339-208ENST00000634934 EPHA10Q5JZY3 1008 aa18.05■□□□□ 0.48
LINC00339-208ENST00000634934 C10orf71Q711Q0 1435 aa18.05■□□□□ 0.48
LINC00339-208ENST00000634934 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
LINC00339-208ENST00000634934 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
LINC00339-208ENST00000634934 PDE8AO60658 829 aa18.04■□□□□ 0.48
LINC00339-208ENST00000634934 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
LINC00339-208ENST00000634934 FOXO4P98177 505 aa18.03■□□□□ 0.48
LINC00339-208ENST00000634934 CCDC85AQ96PX6 553 aaPredicted RBP18.03■□□□□ 0.48
LINC00339-208ENST00000634934 PLA2G12BQ9BX93 195 aa18.03■□□□□ 0.48
LINC00339-208ENST00000634934 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
LINC00339-208ENST00000634934 CD2APQ9Y5K6 639 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms