RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 UBE2OQ9C0C9 1292 aaKnown RBP5.52□□□□□ -1.53
SMARCB1-208ENST00000634926 ZNF232Q9UNY5 417 aa5.52□□□□□ -1.53
SMARCB1-208ENST00000634926 HCN4Q9Y3Q4 1203 aa5.52□□□□□ -1.53
SMARCB1-208ENST00000634926 DEAF1O75398 565 aaPredicted RBP5.51□□□□□ -1.53
SMARCB1-208ENST00000634926 YBX3P16989 372 aaKnown RBP eCLIP5.51□□□□□ -1.533e-8■■■□□ 18.7
SMARCB1-208ENST00000634926 FBXO11Q86XK2 927 aa5.51□□□□□ -1.53
SMARCB1-208ENST00000634926 DNAJB12Q9NXW2 375 aaKnown RBP5.51□□□□□ -1.53
SMARCB1-208ENST00000634926 SERTM1A2A2V5 107 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 ALX3O95076 343 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 FSTP19883 344 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 GRNP28799 593 aaKnown RBP5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 GTF2IP78347 998 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 FZD5Q13467 585 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 BCANQ96GW7 911 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 SUSD3Q96L08 255 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 NEUROD4Q9HD90 331 aa5.5□□□□□ -1.53
SMARCB1-208ENST00000634926 MSL1Q68DK7 614 aa5.49□□□□□ -1.53
SMARCB1-208ENST00000634926 POTEAQ6S8J7 498 aa5.49□□□□□ -1.53
SMARCB1-208ENST00000634926 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
SMARCB1-208ENST00000634926 GPC6Q9Y625 555 aaPredicted RBP5.49□□□□□ -1.53
SMARCB1-208ENST00000634926 ZBTB42B2RXF5 422 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 BACH1O14867 736 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 RGS9O75916 674 aaPredicted RBP5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 IRAK1P51617 712 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 NEUROD1Q13562 356 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 DZIP1LQ8IYY4 767 aaKnown RBP5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 LPIN3Q9BQK8 851 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 GSX2Q9BZM3 304 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 TSPAN10Q9H1Z9 355 aaPredicted RBP5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 KIAA1024Q9UPX6 916 aa5.48□□□□□ -1.53
SMARCB1-208ENST00000634926 BRPF1P55201 1214 aaPredicted RBP5.47□□□□□ -1.53
SMARCB1-208ENST00000634926 GDPD2Q9HCC8 539 aa5.47□□□□□ -1.53
SMARCB1-208ENST00000634926 DLL1O00548 723 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 ZBTB7BO15156 539 aaPredicted RBP5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 TGFB1P01137 390 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 CPB1P15086 417 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 GP2P55259 537 aaKnown RBP5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 PERM1Q5SV97 790 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 C1orf53Q5VUE5 145 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 BTLAQ7Z6A9 289 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 RNF114Q9Y508 228 aa5.46□□□□□ -1.54
SMARCB1-208ENST00000634926 KIAA1324LA8MWY0 1029 aaPredicted RBP5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 C21orf2O43822 256 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 NFKB1P19838 968 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 HIRAP54198 1017 aaPredicted RBP5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 NCOA4Q13772 614 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 FAM35AQ86V20 835 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 DEPDC4Q8N2C3 294 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 ZFATQ9P243 1243 aa5.45□□□□□ -1.54
SMARCB1-208ENST00000634926 APBB1O00213 710 aa5.44□□□□□ -1.54
SMARCB1-208ENST00000634926 PSME1Q06323 249 aa5.44□□□□□ -1.54
SMARCB1-208ENST00000634926 DTWD1Q8N5C7 304 aa5.44□□□□□ -1.54
SMARCB1-208ENST00000634926 BCS1LQ9Y276 419 aa5.44□□□□□ -1.54
SMARCB1-208ENST00000634926 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.44□□□□□ -1.54
SMARCB1-208ENST00000634926 SKIP12755 728 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 ABL2P42684 1182 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 PSMA6P60900 246 aaKnown RBP5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 MLLT1Q03111 559 aaPredicted RBP5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 NEUROD2Q15784 382 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 EML3Q32P44 896 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 ANKIB1Q9P2G1 1089 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 NOD1Q9Y239 953 aa5.43□□□□□ -1.54
SMARCB1-208ENST00000634926 F8W735 103 aaPredicted RBP5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 CLDN10P78369 228 aa5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 SEMA3FQ13275 785 aa5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 AGGF1Q8N302 714 aaeCLIP5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 AKTIPQ9H8T0 292 aa5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 DMGDHQ9UI17 866 aaKnown RBP5.42□□□□□ -1.54
SMARCB1-208ENST00000634926 SPINK2P20155 84 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 JAG1P78504 1218 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 WFDC8Q8IUA0 241 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 ZDHHC13Q8IUH4 622 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 ALDH16A1Q8IZ83 802 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 TPCN2Q8NHX9 752 aa5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 UBL7Q96S82 380 aaPredicted RBP5.41□□□□□ -1.54
SMARCB1-208ENST00000634926 DKK1O94907 266 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 CCINQ13939 588 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 Q6ZS46 218 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 HFE2Q6ZVN8 426 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 TSEN2Q8NCE0 465 aaKnown RBP5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 GAS2L2Q8NHY3 880 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 FRRS1LQ9P0K9 344 aa5.4□□□□□ -1.54
SMARCB1-208ENST00000634926 IGLV1-40P01703 118 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 TARSP26639 723 aaKnown RBP5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 KRT25Q7Z3Z0 450 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 SLC51AQ86UW1 340 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 TMEM130Q8N3G9 435 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 TRPM4Q8TD43 1214 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 IFT43Q96FT9 208 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 ALG2Q9H553 416 aa5.39□□□□□ -1.55
SMARCB1-208ENST00000634926 PRR19A6NJB7 356 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 USP17L5A8MUK1 530 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 CCDC102BQ68D86 513 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 ELMSAN1Q6PJG2 1045 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 DHX32Q7L7V1 743 aaKnown RBP5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 ARMC10Q8N2F6 343 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 TTC9Q92623 222 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 NGLY1Q96IV0 654 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms