RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 GNAI3P08754 354 aa18.59■□□□□ 0.57
LIMS4-203ENST00000632758 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
LIMS4-203ENST00000632758 PCDHB15Q9Y5E8 787 aa18.59■□□□□ 0.57
LIMS4-203ENST00000632758 UTYO14607 1347 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 C4AP0C0L4 1744 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
LIMS4-203ENST00000632758 NUP98P52948 1817 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 CASP7P55210 303 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 NFIXQ14938 502 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 ERICH6BQ5W0A0 696 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 UBE3BQ7Z3V4 1068 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
LIMS4-203ENST00000632758 CHMP4BQ9H444 224 aaKnown RBP18.58■□□□□ 0.56
LIMS4-203ENST00000632758 SUCLG2Q96I99 432 aa18.57■□□□□ 0.56
LIMS4-203ENST00000632758 SETDB2Q96T68 719 aa18.57■□□□□ 0.56
LIMS4-203ENST00000632758 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
LIMS4-203ENST00000632758 TUBGCP6Q96RT7 1819 aa18.57■□□□□ 0.56
LIMS4-203ENST00000632758 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
LIMS4-203ENST00000632758 GNAI2P04899 355 aa18.56■□□□□ 0.56
LIMS4-203ENST00000632758 TM4SF1P30408 202 aa18.56■□□□□ 0.56
LIMS4-203ENST00000632758 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
LIMS4-203ENST00000632758 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
LIMS4-203ENST00000632758 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
LIMS4-203ENST00000632758 BCORQ6W2J9 1755 aa18.56■□□□□ 0.56
LIMS4-203ENST00000632758 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
LIMS4-203ENST00000632758 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
LIMS4-203ENST00000632758 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
LIMS4-203ENST00000632758 UTP14AQ9BVJ6 771 aaKnown RBP18.55■□□□□ 0.56
LIMS4-203ENST00000632758 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
LIMS4-203ENST00000632758 NTSR2O95665 410 aa18.55■□□□□ 0.56
LIMS4-203ENST00000632758 R3HDM1Q15032 1099 aaKnown RBP18.55■□□□□ 0.56
LIMS4-203ENST00000632758 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
LIMS4-203ENST00000632758 AAMPQ13685 434 aa18.54■□□□□ 0.56
LIMS4-203ENST00000632758 PPP1R42Q7Z4L9 355 aa18.54■□□□□ 0.56
LIMS4-203ENST00000632758 NUTM1Q86Y26 1132 aa18.54■□□□□ 0.56
LIMS4-203ENST00000632758 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
LIMS4-203ENST00000632758 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
LIMS4-203ENST00000632758 DDR1Q08345 913 aa18.53■□□□□ 0.56
LIMS4-203ENST00000632758 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
LIMS4-203ENST00000632758 SIRT2Q8IXJ6 389 aa18.52■□□□□ 0.56
LIMS4-203ENST00000632758 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
LIMS4-203ENST00000632758 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 ERFEQ4G0M1 354 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 CEP85Q6P2H3 762 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 NBPF5PQ86XG9 351 aaPredicted RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 ANKRD36CQ5JPF3 1778 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 SH3TC1Q8TE82 1336 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 PSDA5PKW4 1024 aaPredicted RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 POLRMTO00411 1230 aaKnown RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 SERPINB2P05120 415 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
LIMS4-203ENST00000632758 FOXO4P98177 505 aa18.51■□□□□ 0.55
LIMS4-203ENST00000632758 IGHDP01880 384 aa18.5■□□□□ 0.55
LIMS4-203ENST00000632758 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
LIMS4-203ENST00000632758 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
LIMS4-203ENST00000632758 CARMIL3Q8ND23 1372 aa18.5■□□□□ 0.55
LIMS4-203ENST00000632758 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
LIMS4-203ENST00000632758 PNMA6EA0A0J9YXQ4 647 aa18.49■□□□□ 0.55
LIMS4-203ENST00000632758 MMP10P09238 476 aa18.49■□□□□ 0.55
LIMS4-203ENST00000632758 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
LIMS4-203ENST00000632758 ATP8B2P98198 1209 aa18.49■□□□□ 0.55
LIMS4-203ENST00000632758 RPAP2Q8IXW5 612 aaPredicted RBP18.49■□□□□ 0.55
LIMS4-203ENST00000632758 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
LIMS4-203ENST00000632758 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
LIMS4-203ENST00000632758 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
LIMS4-203ENST00000632758 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
LIMS4-203ENST00000632758 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 LMBR1LQ6UX01 489 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 SLC16A10Q8TF71 515 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 QSER1Q2KHR3 1735 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 PDE8AO60658 829 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 RABL6Q3YEC7 729 aaPredicted RBP18.47■□□□□ 0.55
LIMS4-203ENST00000632758 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
LIMS4-203ENST00000632758 CCDC85AQ96PX6 553 aaPredicted RBP18.47■□□□□ 0.55
LIMS4-203ENST00000632758 NPHP1O15259 732 aa18.46■□□□□ 0.55
LIMS4-203ENST00000632758 C3orf67Q6ZVT6 689 aa18.46■□□□□ 0.55
LIMS4-203ENST00000632758 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
LIMS4-203ENST00000632758 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
LIMS4-203ENST00000632758 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
LIMS4-203ENST00000632758 CSF1RP07333 972 aa18.45■□□□□ 0.54
LIMS4-203ENST00000632758 MTX1Q13505 466 aa18.45■□□□□ 0.54
LIMS4-203ENST00000632758 TTLL11Q8NHH1 800 aa18.45■□□□□ 0.54
LIMS4-203ENST00000632758 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
LIMS4-203ENST00000632758 CTSWP56202 376 aa18.44■□□□□ 0.54
LIMS4-203ENST00000632758 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
LIMS4-203ENST00000632758 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
LIMS4-203ENST00000632758 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
LIMS4-203ENST00000632758 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
LIMS4-203ENST00000632758 POLA2Q14181 598 aa18.43■□□□□ 0.54
LIMS4-203ENST00000632758 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
LIMS4-203ENST00000632758 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
LIMS4-203ENST00000632758 ST5P78524 1137 aa18.42■□□□□ 0.54
LIMS4-203ENST00000632758 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
LIMS4-203ENST00000632758 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
LIMS4-203ENST00000632758 GREM2Q9H772 168 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms