RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 TRAF5O00463 557 aa13.45□□□□□ -0.26
SOX2-OT-257ENST00000630553 PRKAR2BP31323 418 aa13.45□□□□□ -0.26
SOX2-OT-257ENST00000630553 CST9Q5W186 159 aa13.45□□□□□ -0.26
SOX2-OT-257ENST00000630553 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-257ENST00000630553 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
SOX2-OT-257ENST00000630553 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 A1BGP04217 495 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 ALDH1B1P30837 517 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 EPS15P42566 896 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 TEFQ10587 303 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-257ENST00000630553 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 KDM3BQ7LBC6 1761 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 FAM177BA6PVY3 158 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 USP50Q70EL3 339 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 TRPM7Q96QT4 1865 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 PNNQ9H307 717 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
SOX2-OT-257ENST00000630553 CCER2I3L3R5 266 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 SOX10P56693 466 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 ZNF408Q9H9D4 720 aa13.42□□□□□ -0.26
SOX2-OT-257ENST00000630553 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 LARGE2Q8N3Y3 721 aa13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 PSMD1Q99460 953 aa13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
SOX2-OT-257ENST00000630553 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 SCNN1DP51172 638 aa13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 ADAMTS8Q9UP79 889 aa13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
SOX2-OT-257ENST00000630553 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-257ENST00000630553 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-257ENST00000630553 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-257ENST00000630553 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 NFE2L2Q16236 605 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 MAPK8IP3Q9UPT6 1336 aa13.38□□□□□ -0.27
SOX2-OT-257ENST00000630553 NOGQ13253 232 aa13.37□□□□□ -0.27
SOX2-OT-257ENST00000630553 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
SOX2-OT-257ENST00000630553 LAMB4A4D0S4 1761 aa13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 BTBD11A6QL63 1104 aa13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 NEFMP07197 916 aa13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 RPGRQ92834 1020 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-257ENST00000630553 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
SOX2-OT-257ENST00000630553 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
SOX2-OT-257ENST00000630553 GPRC5DQ9NZD1 345 aa13.35□□□□□ -0.27
SOX2-OT-257ENST00000630553 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
SOX2-OT-257ENST00000630553 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
SOX2-OT-257ENST00000630553 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-257ENST00000630553 KCNQ3O43525 872 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 HUNKP57058 714 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 CDC37L1Q7L3B6 337 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
SOX2-OT-257ENST00000630553 COL4A5P29400 1685 aa13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 AOC3Q16853 763 aa13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-257ENST00000630553 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 TRPA1O75762 1119 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 CRY2Q49AN0 593 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 SAGE1Q9NXZ1 904 aa13.31□□□□□ -0.28
SOX2-OT-257ENST00000630553 CXCL9Q07325 125 aa13.3□□□□□ -0.28
SOX2-OT-257ENST00000630553 HLFQ16534 295 aa13.3□□□□□ -0.28
SOX2-OT-257ENST00000630553 USP48Q86UV5 1035 aa13.3□□□□□ -0.28
SOX2-OT-257ENST00000630553 MIER1Q8N108 512 aa13.3□□□□□ -0.28
SOX2-OT-257ENST00000630553 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
SOX2-OT-257ENST00000630553 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms