RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 LTBP1Q14766 1721 aa26.83■■□□□ 1.89
TARDBP-228ENST00000629725 HTATSF1O43719 755 aaKnown RBP26.83■■□□□ 1.89
TARDBP-228ENST00000629725 TAF7Q15545 349 aaPredicted RBP26.83■■□□□ 1.89
TARDBP-228ENST00000629725 ABCC12Q96J65 1359 aa26.83■■□□□ 1.88
TARDBP-228ENST00000629725 ABHD8Q96I13 439 aa26.82■■□□□ 1.88
TARDBP-228ENST00000629725 COL4A5P29400 1685 aa26.82■■□□□ 1.88
TARDBP-228ENST00000629725 NGEFQ8N5V2 710 aa26.81■■□□□ 1.88
TARDBP-228ENST00000629725 RPGRQ92834 1020 aaKnown RBP26.81■■□□□ 1.88
TARDBP-228ENST00000629725 ERVV-1B6SEH8 477 aa26.8■■□□□ 1.88
TARDBP-228ENST00000629725 GRIPAP1Q4V328 841 aa26.8■■□□□ 1.88
TARDBP-228ENST00000629725 MIS18AQ9NYP9 233 aa26.8■■□□□ 1.88
TARDBP-228ENST00000629725 TRPM7Q96QT4 1865 aa26.8■■□□□ 1.88
TARDBP-228ENST00000629725 SCNN1DP51172 638 aa26.79■■□□□ 1.88
TARDBP-228ENST00000629725 LARGE2Q8N3Y3 721 aa26.79■■□□□ 1.88
TARDBP-228ENST00000629725 THSD7BQ9C0I4 1608 aa26.79■■□□□ 1.88
TARDBP-228ENST00000629725 HOXA10P31260 410 aaPredicted RBP26.78■■□□□ 1.88
TARDBP-228ENST00000629725 EPS15P42566 896 aa26.78■■□□□ 1.88
TARDBP-228ENST00000629725 PAXIP1Q6ZW49 1069 aaPredicted RBP26.78■■□□□ 1.88
TARDBP-228ENST00000629725 BEGAINQ9BUH8 593 aa26.78■■□□□ 1.88
TARDBP-228ENST00000629725 MAP3K15Q6ZN16 1313 aa26.78■■□□□ 1.88
TARDBP-228ENST00000629725 ECE1P42892 770 aa26.77■■□□□ 1.88
TARDBP-228ENST00000629725 FMR1Q06787 632 aaKnown RBP eCLIP26.77■■□□□ 1.88
TARDBP-228ENST00000629725 KIF6Q6ZMV9 814 aa26.77■■□□□ 1.88
TARDBP-228ENST00000629725 USP50Q70EL3 339 aaPredicted RBP26.77■■□□□ 1.88
TARDBP-228ENST00000629725 CAPNS2Q96L46 248 aa26.77■■□□□ 1.88
TARDBP-228ENST00000629725 RIC1Q4ADV7 1423 aa26.76■■□□□ 1.87
TARDBP-228ENST00000629725 GPTP24298 496 aa26.75■■□□□ 1.87
TARDBP-228ENST00000629725 GRM1Q13255 1194 aa26.75■■□□□ 1.87
TARDBP-228ENST00000629725 RBM17Q96I25 401 aaKnown RBP26.75■■□□□ 1.87
TARDBP-228ENST00000629725 GPR101Q96P66 508 aaPredicted RBP26.75■■□□□ 1.87
TARDBP-228ENST00000629725 RRP7AQ9Y3A4 280 aaKnown RBP26.75■■□□□ 1.87
TARDBP-228ENST00000629725 KDM3BQ7LBC6 1761 aa26.75■■□□□ 1.87
TARDBP-228ENST00000629725 DLG5Q8TDM6 1919 aa26.75■■□□□ 1.87
TARDBP-228ENST00000629725 IBTKQ9P2D0 1353 aaPredicted RBP26.74■■□□□ 1.87
TARDBP-228ENST00000629725 PPEF1O14829 653 aaPredicted RBP26.74■■□□□ 1.87
TARDBP-228ENST00000629725 PPP2R1AP30153 589 aa26.74■■□□□ 1.87
TARDBP-228ENST00000629725 FAM161AQ3B820 660 aa26.74■■□□□ 1.87
TARDBP-228ENST00000629725 CYP4F22Q6NT55 531 aa26.74■■□□□ 1.87
TARDBP-228ENST00000629725 TTLL7Q6ZT98 887 aa26.74■■□□□ 1.87
TARDBP-228ENST00000629725 CRAMP1Q96RY5 1269 aa26.74■■□□□ 1.87
TARDBP-228ENST00000629725 UBN2Q6ZU65 1347 aa26.73■■□□□ 1.87
TARDBP-228ENST00000629725 TCERG1O14776 1098 aaKnown RBP26.73■■□□□ 1.87
TARDBP-228ENST00000629725 CST9Q5W186 159 aa26.73■■□□□ 1.87
TARDBP-228ENST00000629725 NIM1KQ8IY84 436 aa26.73■■□□□ 1.87
TARDBP-228ENST00000629725 PNISRQ8TF01 805 aaKnown RBP26.73■■□□□ 1.87
TARDBP-228ENST00000629725 TRAF5O00463 557 aa26.72■■□□□ 1.87
TARDBP-228ENST00000629725 MYL6BP14649 208 aa26.72■■□□□ 1.87
TARDBP-228ENST00000629725 SUSD4Q5VX71 490 aa26.72■■□□□ 1.87
TARDBP-228ENST00000629725 ZBTB3Q9H5J0 574 aa26.72■■□□□ 1.87
TARDBP-228ENST00000629725 TLL2Q9Y6L7 1015 aa26.71■■□□□ 1.87
TARDBP-228ENST00000629725 PPIP5K2O43314 1243 aa26.7■■□□□ 1.86
TARDBP-228ENST00000629725 SLC51AQ86UW1 340 aa26.7■■□□□ 1.86
TARDBP-228ENST00000629725 TMX4Q9H1E5 349 aaPredicted RBP26.7■■□□□ 1.86
TARDBP-228ENST00000629725 EIF4A1P60842 406 aaKnown RBP26.69■■□□□ 1.86
TARDBP-228ENST00000629725 ZNF34Q8IZ26 560 aa26.69■■□□□ 1.86
TARDBP-228ENST00000629725 ADARB2Q9NS39 739 aaKnown RBP26.69■■□□□ 1.86
TARDBP-228ENST00000629725 CCDC85CA6NKD9 419 aa26.68■■□□□ 1.86
TARDBP-228ENST00000629725 NTSR2O95665 410 aa26.68■■□□□ 1.86
TARDBP-228ENST00000629725 NEFMP07197 916 aa26.68■■□□□ 1.86
TARDBP-228ENST00000629725 AOC3Q16853 763 aa26.68■■□□□ 1.86
TARDBP-228ENST00000629725 GPRC5DQ9NZD1 345 aa26.68■■□□□ 1.86
TARDBP-228ENST00000629725 SLC34A2O95436 690 aa26.67■■□□□ 1.86
TARDBP-228ENST00000629725 MAP2K2P36507 400 aa26.67■■□□□ 1.86
TARDBP-228ENST00000629725 GIGYF2Q6Y7W6 1299 aaKnown RBP26.67■■□□□ 1.86
TARDBP-228ENST00000629725 PPP1R42Q7Z4L9 355 aa26.67■■□□□ 1.86
TARDBP-228ENST00000629725 NLRP3Q96P20 1036 aa26.67■■□□□ 1.86
TARDBP-228ENST00000629725 VPS33BQ9H267 617 aa26.67■■□□□ 1.86
TARDBP-228ENST00000629725 C3orf67Q6ZVT6 689 aa26.66■■□□□ 1.86
TARDBP-228ENST00000629725 AOC2O75106 756 aa26.65■■□□□ 1.86
TARDBP-228ENST00000629725 TSKSQ9UJT2 592 aa26.65■■□□□ 1.86
TARDBP-228ENST00000629725 ATP6V0A2Q9Y487 856 aa26.65■■□□□ 1.86
TARDBP-228ENST00000629725 MLLT1Q03111 559 aaPredicted RBP26.64■■□□□ 1.86
TARDBP-228ENST00000629725 SAPCD2Q86UD0 394 aa26.64■■□□□ 1.86
TARDBP-228ENST00000629725 ZNRF3Q9ULT6 936 aa26.64■■□□□ 1.86
TARDBP-228ENST00000629725 CELF2O95319 508 aaKnown RBP26.63■■□□□ 1.85
TARDBP-228ENST00000629725 CXCL9Q07325 125 aa26.63■■□□□ 1.85
TARDBP-228ENST00000629725 PARP10Q53GL7 1025 aa26.63■■□□□ 1.85
TARDBP-228ENST00000629725 SUPT20HQ8NEM7 779 aa26.63■■□□□ 1.85
TARDBP-228ENST00000629725 ERBB4Q15303 1308 aa26.62■■□□□ 1.85
TARDBP-228ENST00000629725 CA12O43570 354 aa26.61■■□□□ 1.85
TARDBP-228ENST00000629725 RGS19P49795 217 aa26.61■■□□□ 1.85
TARDBP-228ENST00000629725 RTFDC1Q9BY42 306 aaPredicted RBP26.61■■□□□ 1.85
TARDBP-228ENST00000629725 ABCC4O15439 1325 aa26.61■■□□□ 1.85
TARDBP-228ENST00000629725 GMPSP49915 693 aaPredicted RBP26.6■■□□□ 1.85
TARDBP-228ENST00000629725 SLC10A5Q5PT55 438 aa26.6■■□□□ 1.85
TARDBP-228ENST00000629725 HHIPL1Q96JK4 782 aa26.6■■□□□ 1.85
TARDBP-228ENST00000629725 THUMPD2Q9BTF0 503 aaKnown RBP26.6■■□□□ 1.85
TARDBP-228ENST00000629725 UTP14AQ9BVJ6 771 aaKnown RBP26.6■■□□□ 1.85
TARDBP-228ENST00000629725 CASP8AP2Q9UKL3 1982 aa26.59■■□□□ 1.85
TARDBP-228ENST00000629725 DPP8Q6V1X1 898 aaPredicted RBP26.59■■□□□ 1.85
TARDBP-228ENST00000629725 GLIS2Q9BZE0 524 aaPredicted RBP26.59■■□□□ 1.85
TARDBP-228ENST00000629725 NFE2L2Q16236 605 aa26.58■■□□□ 1.85
TARDBP-228ENST00000629725 PLEKHF1Q96S99 279 aa26.58■■□□□ 1.85
TARDBP-228ENST00000629725 PGAP2Q9UHJ9 254 aa26.58■■□□□ 1.85
TARDBP-228ENST00000629725 CDHR2Q9BYE9 1310 aa26.58■■□□□ 1.85
TARDBP-228ENST00000629725 LAMB2P55268 1798 aa26.58■■□□□ 1.85
TARDBP-228ENST00000629725 ANKRD36CQ5JPF3 1778 aa26.57■■□□□ 1.84
TARDBP-228ENST00000629725 BBOX1O75936 387 aa26.57■■□□□ 1.84
TARDBP-228ENST00000629725 BRPF1P55201 1214 aaPredicted RBP26.57■■□□□ 1.84
TARDBP-228ENST00000629725 CIAPIN1Q6FI81 312 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms