RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
DDX41-219ENST00000629036 VAMP4O75379 141 aa14.37□□□□□ -0.11
DDX41-219ENST00000629036 GPTP24298 496 aa14.37□□□□□ -0.11
DDX41-219ENST00000629036 EXOSC9Q06265 439 aaKnown RBP14.37□□□□□ -0.11
DDX41-219ENST00000629036 SUSD4Q5VX71 490 aa14.37□□□□□ -0.11
DDX41-219ENST00000629036 NBPF5PQ86XG9 351 aaPredicted RBP14.37□□□□□ -0.11
DDX41-219ENST00000629036 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
DDX41-219ENST00000629036 TRMT2AQ8IZ69 625 aaKnown RBP14.36□□□□□ -0.11
DDX41-219ENST00000629036 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
DDX41-219ENST00000629036 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
DDX41-219ENST00000629036 SRGNP10124 158 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 TCIRG1Q13488 830 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 G2E3Q7L622 706 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 NLRP10Q86W26 655 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
DDX41-219ENST00000629036 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
DDX41-219ENST00000629036 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
DDX41-219ENST00000629036 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 FSTL1Q12841 308 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 CCDC30Q5VVM6 783 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 C9orf131Q5VYM1 1079 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
DDX41-219ENST00000629036 TCERG1O14776 1098 aaKnown RBP14.33□□□□□ -0.12
DDX41-219ENST00000629036 PDE6BP35913 854 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 ST5P78524 1137 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 PARP10Q53GL7 1025 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 TPTE2Q6XPS3 522 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 CDCA7LQ96GN5 454 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 RRAGCQ9HB90 399 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
DDX41-219ENST00000629036 FAM177BA6PVY3 158 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 TRIM28Q13263 835 aaKnown RBP14.32□□□□□ -0.12
DDX41-219ENST00000629036 HSP90AB3PQ58FF7 597 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
DDX41-219ENST00000629036 STYK1Q6J9G0 422 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 A0A1B0GUL6 1792 aa14.32□□□□□ -0.12
DDX41-219ENST00000629036 H0YIN7 160 aa14.31□□□□□ -0.12
DDX41-219ENST00000629036 SLC10A5Q5PT55 438 aa14.31□□□□□ -0.12
DDX41-219ENST00000629036 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
DDX41-219ENST00000629036 C7orf43Q8WVR3 580 aa14.31□□□□□ -0.12
DDX41-219ENST00000629036 E9PSI1 815 aa14.3□□□□□ -0.12
DDX41-219ENST00000629036 TTLL6Q8N841 843 aa14.3□□□□□ -0.12
DDX41-219ENST00000629036 KDM2BQ8NHM5 1336 aa14.3□□□□□ -0.12
DDX41-219ENST00000629036 DUOX1Q9NRD9 1551 aa14.3□□□□□ -0.12
DDX41-219ENST00000629036 ATP5J2-PTCD1G3V325 749 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 NFKBIEO00221 500 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 HOXA10P31260 410 aaPredicted RBP14.29□□□□□ -0.12
DDX41-219ENST00000629036 FLIIQ13045 1269 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 PRPF40BQ6NWY9 871 aaKnown RBP14.29□□□□□ -0.12
DDX41-219ENST00000629036 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 MASTLQ96GX5 879 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
DDX41-219ENST00000629036 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
DDX41-219ENST00000629036 COL4A5P29400 1685 aa14.29□□□□□ -0.12
DDX41-219ENST00000629036 PI4KAP2A4QPH2 592 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 SLC34A2O95436 690 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 NPR1P16066 1061 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 KSR2Q6VAB6 950 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 PI4KAP1Q8N8J0 262 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 RNF181Q9P0P0 153 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 MAP3K2Q9Y2U5 619 aa14.28□□□□□ -0.12
DDX41-219ENST00000629036 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
DDX41-219ENST00000629036 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.13
DDX41-219ENST00000629036 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.131e-8■■□□□ 14.3
DDX41-219ENST00000629036 STK31Q9BXU1 1019 aa14.27□□□□□ -0.13
DDX41-219ENST00000629036 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
DDX41-219ENST00000629036 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
DDX41-219ENST00000629036 RASSF7Q02833 373 aa14.26□□□□□ -0.13
DDX41-219ENST00000629036 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
DDX41-219ENST00000629036 MYD88Q99836 296 aa14.26□□□□□ -0.13
DDX41-219ENST00000629036 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 NPHP1O15259 732 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
DDX41-219ENST00000629036 TRMT112Q9UI30 125 aaKnown RBP14.25□□□□□ -0.13
DDX41-219ENST00000629036 ABCC4O15439 1325 aa14.24□□□□□ -0.13
DDX41-219ENST00000629036 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
DDX41-219ENST00000629036 C21orf2O43822 256 aa14.24□□□□□ -0.13
DDX41-219ENST00000629036 DDX58O95786 925 aaKnown RBP14.24□□□□□ -0.13
DDX41-219ENST00000629036 CASP7P55210 303 aa14.24□□□□□ -0.13
DDX41-219ENST00000629036 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
DDX41-219ENST00000629036 MRPL50Q8N5N7 158 aaKnown RBP14.24□□□□□ -0.13
DDX41-219ENST00000629036 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms