RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 EXOC6BQ9Y2D4 811 aa30.93■■■□□ 2.54
CAPNS1-215ENST00000628018 RTCBQ9Y3I0 505 aaKnown RBP30.93■■■□□ 2.54
CAPNS1-215ENST00000628018 RGL2O15211 777 aa30.92■■■□□ 2.54
CAPNS1-215ENST00000628018 ZBTB38Q8NAP3 1195 aaPredicted RBP30.92■■■□□ 2.54
CAPNS1-215ENST00000628018 SCN7AQ01118 1682 aa30.91■■■□□ 2.54
CAPNS1-215ENST00000628018 TNS1Q9HBL0 1735 aaKnown RBP30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 UBN2Q6ZU65 1347 aa30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 FOXO4P98177 505 aa30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 TXNRD1Q16881 649 aa30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 CLEC4GQ6UXB4 293 aa30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 PROM2Q8N271 834 aa30.9■■■□□ 2.54
CAPNS1-215ENST00000628018 RTL5Q5HYW3 569 aaPredicted RBP30.89■■■□□ 2.54
CAPNS1-215ENST00000628018 ZNF652Q9Y2D9 606 aa30.89■■■□□ 2.54
CAPNS1-215ENST00000628018 NOP58Q9Y2X3 529 aaKnown RBP30.89■■■□□ 2.54
CAPNS1-215ENST00000628018 APBA3O96018 575 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 AK7Q96M32 723 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 NARFQ9UHQ1 456 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 CDHR2Q9BYE9 1310 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 SURF6O75683 361 aaKnown RBP30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 HMGB2P26583 209 aaKnown RBP30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 SMIM5Q71RC9 77 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 AMIGO3Q86WK7 504 aa30.88■■■□□ 2.53
CAPNS1-215ENST00000628018 RAB11FIP3O75154 756 aa30.87■■■□□ 2.53
CAPNS1-215ENST00000628018 FAM89AQ96GI7 184 aa30.87■■■□□ 2.53
CAPNS1-215ENST00000628018 ZBTB47Q9UFB7 747 aaPredicted RBP30.87■■■□□ 2.53
CAPNS1-215ENST00000628018 APBB1O00213 710 aa30.86■■■□□ 2.53
CAPNS1-215ENST00000628018 PLA2G12BQ9BX93 195 aa30.86■■■□□ 2.53
CAPNS1-215ENST00000628018 PARP10Q53GL7 1025 aa30.85■■■□□ 2.53
CAPNS1-215ENST00000628018 HSP90AB4PQ58FF6 505 aa30.85■■■□□ 2.53
CAPNS1-215ENST00000628018 LRRCC1Q9C099 1032 aa30.85■■■□□ 2.53
CAPNS1-215ENST00000628018 UBR3Q6ZT12 1888 aa30.85■■■□□ 2.53
CAPNS1-215ENST00000628018 SMARCA5O60264 1052 aaPredicted RBP30.84■■■□□ 2.53
CAPNS1-215ENST00000628018 C4AP0C0L4 1744 aa30.84■■■□□ 2.53
CAPNS1-215ENST00000628018 LMBR1LQ6UX01 489 aa30.84■■■□□ 2.53
CAPNS1-215ENST00000628018 ARHGEF1Q92888 912 aaKnown RBP30.84■■■□□ 2.53
CAPNS1-215ENST00000628018 TRMT112Q9UI30 125 aaKnown RBP30.84■■■□□ 2.53
CAPNS1-215ENST00000628018 BCL2L12Q9HB09 334 aa30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 RGPD3A6NKT7 1758 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 RGPD4Q7Z3J3 1758 aa30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 RFX5P48382 616 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 TRAPPC3LQ5T215 181 aa30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 SUSD4Q5VX71 490 aa30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 PA2G4Q9UQ80 394 aaKnown RBP30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 NIP7Q9Y221 180 aaKnown RBP eCLIP30.83■■■□□ 2.53
CAPNS1-215ENST00000628018 ADRA2BP18089 450 aa30.82■■■□□ 2.52
CAPNS1-215ENST00000628018 USPL1Q5W0Q7 1092 aa30.82■■■□□ 2.52
CAPNS1-215ENST00000628018 ZPR1O75312 459 aa30.81■■■□□ 2.52
CAPNS1-215ENST00000628018 SYNE4Q8N205 404 aa30.81■■■□□ 2.52
CAPNS1-215ENST00000628018 TSHZ2Q9NRE2 1034 aa30.81■■■□□ 2.52
CAPNS1-215ENST00000628018 C16orf71Q8IYS4 520 aaPredicted RBP30.8■■■□□ 2.52
CAPNS1-215ENST00000628018 COPRSQ9NQ92 184 aa30.8■■■□□ 2.52
CAPNS1-215ENST00000628018 SRP68Q9UHB9 627 aaKnown RBP30.8■■■□□ 2.52
CAPNS1-215ENST00000628018 RHPN1Q8TCX5 695 aa30.79■■■□□ 2.52
CAPNS1-215ENST00000628018 KIF1BPQ96EK5 621 aa30.79■■■□□ 2.52
CAPNS1-215ENST00000628018 UTP14AQ9BVJ6 771 aaKnown RBP30.79■■■□□ 2.52
CAPNS1-215ENST00000628018 PTPN12Q05209 780 aaKnown RBP30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 USP42Q9H9J4 1324 aaKnown RBP30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 IRS4O14654 1257 aaPredicted RBP30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 PHF14O94880 888 aa30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 CSF1RP07333 972 aa30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 RFC4P35249 363 aa30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 PLEKHM2Q8IWE5 1019 aa30.78■■■□□ 2.52
CAPNS1-215ENST00000628018 NTSR2O95665 410 aa30.77■■■□□ 2.52
CAPNS1-215ENST00000628018 SSFA2P28290 1259 aa30.77■■■□□ 2.52
CAPNS1-215ENST00000628018 SH3TC1Q8TE82 1336 aa30.76■■■□□ 2.52
CAPNS1-215ENST00000628018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.76■■■□□ 2.51
CAPNS1-215ENST00000628018 ERC1Q8IUD2 1116 aa30.76■■■□□ 2.51
CAPNS1-215ENST00000628018 KLHDC4Q8TBB5 520 aa30.76■■■□□ 2.51
CAPNS1-215ENST00000628018 G3BP1Q13283 466 aaKnown RBP eCLIP30.75■■■□□ 2.518e-8■■■■□ 23.7
CAPNS1-215ENST00000628018 OS9Q13438 667 aaPredicted RBP30.75■■■□□ 2.51
CAPNS1-215ENST00000628018 TBC1D9BQ66K14 1250 aa30.75■■■□□ 2.51
CAPNS1-215ENST00000628018 OTUD7AQ8TE49 926 aaPredicted RBP30.75■■■□□ 2.51
CAPNS1-215ENST00000628018 CHMP3Q9Y3E7 222 aa30.75■■■□□ 2.51
CAPNS1-215ENST00000628018 MYH3P11055 1940 aa30.75■■■□□ 2.51
CAPNS1-215ENST00000628018 PDE8AO60658 829 aa30.74■■■□□ 2.51
CAPNS1-215ENST00000628018 COL24A1Q17RW2 1714 aa30.74■■■□□ 2.51
CAPNS1-215ENST00000628018 FAM161AQ3B820 660 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 SALL3Q9BXA9 1300 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 FAM177BA6PVY3 158 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 BACH2Q9BYV9 841 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 BCL11AQ9H165 835 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 IL1RAPL2Q9NP60 686 aa30.73■■■□□ 2.51
CAPNS1-215ENST00000628018 LAMB2P55268 1798 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 DDX60Q8IY21 1712 aaKnown RBP30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 SASH1O94885 1247 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 CTSWP56202 376 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 TTLL11Q8NHH1 800 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 AKT1S1Q96B36 256 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 SIL1Q9H173 461 aa30.72■■■□□ 2.51
CAPNS1-215ENST00000628018 C8orf34Q49A92 452 aa30.71■■■□□ 2.51
CAPNS1-215ENST00000628018 OSBPL3Q9H4L5 887 aa30.7■■■□□ 2.51
CAPNS1-215ENST00000628018 ZNF827Q17R98 1081 aa30.69■■■□□ 2.5
CAPNS1-215ENST00000628018 BICDL1Q6ZP65 573 aa30.69■■■□□ 2.5
CAPNS1-215ENST00000628018 SETDB2Q96T68 719 aa30.69■■■□□ 2.5
CAPNS1-215ENST00000628018 HSP90B1P14625 803 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-215ENST00000628018 CCDC57Q2TAC2 916 aa30.68■■■□□ 2.5
CAPNS1-215ENST00000628018 BMP2KLQ5H9B9 411 aa30.68■■■□□ 2.5
CAPNS1-215ENST00000628018 HCLS1P14317 486 aaPredicted RBP30.67■■■□□ 2.5
CAPNS1-215ENST00000628018 PDE1AP54750 535 aa30.67■■■□□ 2.5
CAPNS1-215ENST00000628018 NUTM1Q86Y26 1132 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms