RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 LARGE1O95461 756 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 ERBB3P21860 1342 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 ABCC6O95255 1503 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 CPA1P15085 419 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 KCNJ4P48050 445 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 ANKRD1Q15327 319 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 RIC3Q7Z5B4 369 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 MTMR6Q9Y217 621 aa22.94■■□□□ 1.26
PTBP1-220ENST00000627714 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
PTBP1-220ENST00000627714 NMIQ13287 307 aaPredicted RBP22.93■■□□□ 1.26
PTBP1-220ENST00000627714 ALDH8A1Q9H2A2 487 aaPredicted RBP22.93■■□□□ 1.26
PTBP1-220ENST00000627714 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
PTBP1-220ENST00000627714 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 LARP6Q9BRS8 491 aaKnown RBP22.92■■□□□ 1.26
PTBP1-220ENST00000627714 C5P01031 1676 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 AIMP1Q12904 312 aaKnown RBP22.92■■□□□ 1.26
PTBP1-220ENST00000627714 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
PTBP1-220ENST00000627714 KRT28Q7Z3Y7 464 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 RAPGEF4Q8WZA2 1011 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 HMG20BQ9P0W2 317 aa22.92■■□□□ 1.26
PTBP1-220ENST00000627714 JCADQ9P266 1359 aa22.91■■□□□ 1.26
PTBP1-220ENST00000627714 MED23Q9ULK4 1368 aa22.91■■□□□ 1.26
PTBP1-220ENST00000627714 NEURL1BA8MQ27 555 aa22.91■■□□□ 1.26
PTBP1-220ENST00000627714 PTMAP06454 111 aaKnown RBP22.91■■□□□ 1.26
PTBP1-220ENST00000627714 PDCP20941 246 aa22.91■■□□□ 1.26
PTBP1-220ENST00000627714 SLC27A2O14975 620 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 FIBPO43427 364 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
PTBP1-220ENST00000627714 ME3Q16798 604 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 FAM227BQ96M60 508 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 FSD1Q9BTV5 496 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 CCDC8Q9H0W5 538 aaPredicted RBP22.9■■□□□ 1.26
PTBP1-220ENST00000627714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.9■■□□□ 1.26
PTBP1-220ENST00000627714 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 GCKRQ14397 625 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 METTL22Q9BUU2 404 aaPredicted RBP22.9■■□□□ 1.26
PTBP1-220ENST00000627714 RGPD5Q99666 1765 aa22.9■■□□□ 1.26
PTBP1-220ENST00000627714 UBE2Q2Q8WVN8 375 aa22.89■■□□□ 1.26
PTBP1-220ENST00000627714 COL15A1P39059 1388 aa22.89■■□□□ 1.26
PTBP1-220ENST00000627714 RFX7Q2KHR2 1363 aa22.89■■□□□ 1.26
PTBP1-220ENST00000627714 TSGA10IPQ3SY00 556 aa22.89■■□□□ 1.25
PTBP1-220ENST00000627714 BLOC1S2Q6QNY1 142 aa22.89■■□□□ 1.25
PTBP1-220ENST00000627714 ALS2Q96Q42 1657 aa22.88■■□□□ 1.25
PTBP1-220ENST00000627714 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
PTBP1-220ENST00000627714 ST3GAL1Q11201 340 aa22.88■■□□□ 1.25
PTBP1-220ENST00000627714 COPRSQ9NQ92 184 aa22.88■■□□□ 1.25
PTBP1-220ENST00000627714 DNM1Q05193 864 aaKnown RBP22.87■■□□□ 1.25
PTBP1-220ENST00000627714 BOLA2Q9H3K6 86 aa22.87■■□□□ 1.25
PTBP1-220ENST00000627714 TPCN1Q9ULQ1 816 aa22.87■■□□□ 1.25
PTBP1-220ENST00000627714 C1orf167Q5SNV9 1468 aa22.87■■□□□ 1.25
PTBP1-220ENST00000627714 A0A0D9SFI3 127 aa22.86■■□□□ 1.25
PTBP1-220ENST00000627714 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
PTBP1-220ENST00000627714 TLR7Q9NYK1 1049 aaKnown RBP22.86■■□□□ 1.25
PTBP1-220ENST00000627714 VPS37CA5D8V6 355 aaPredicted RBP22.86■■□□□ 1.25
PTBP1-220ENST00000627714 PHKG2P15735 406 aa22.86■■□□□ 1.25
PTBP1-220ENST00000627714 KRT32Q14532 448 aa22.86■■□□□ 1.25
PTBP1-220ENST00000627714 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
PTBP1-220ENST00000627714 SIL1Q9H173 461 aa22.86■■□□□ 1.25
PTBP1-220ENST00000627714 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.86■■□□□ 1.25
PTBP1-220ENST00000627714 RPS6KB1P23443 525 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 KIAA2012Q0VF49 1180 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 LARP1BQ659C4 914 aaKnown RBP22.85■■□□□ 1.25
PTBP1-220ENST00000627714 ELP1O95163 1332 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 ATP5JP18859 108 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 KRT85P78386 507 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 COPS6Q7L5N1 327 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 MYD88Q99836 296 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 FUCA2Q9BTY2 467 aa22.85■■□□□ 1.25
PTBP1-220ENST00000627714 R3HCC1Q9Y3T6 440 aaKnown RBP22.84■■□□□ 1.25
PTBP1-220ENST00000627714 ADAMTSL3P82987 1691 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 HCLS1P14317 486 aaPredicted RBP22.84■■□□□ 1.25
PTBP1-220ENST00000627714 MYL6BP14649 208 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 SLC39A6Q13433 755 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 GLIPR1L2Q4G1C9 344 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 ANKRD13DQ6ZTN6 518 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 IFNL2Q8IZJ0 200 aa22.84■■□□□ 1.25
PTBP1-220ENST00000627714 SNRPA1P09661 255 aaKnown RBP22.83■■□□□ 1.25
PTBP1-220ENST00000627714 USPL1Q5W0Q7 1092 aa22.83■■□□□ 1.25
PTBP1-220ENST00000627714 NECAB1Q8N987 351 aa22.83■■□□□ 1.25
PTBP1-220ENST00000627714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.83■■□□□ 1.252e-6■■■□□ 15.4
PTBP1-220ENST00000627714 PRKCSHP14314 528 aaPredicted RBP22.82■■□□□ 1.24
PTBP1-220ENST00000627714 USP25Q9UHP3 1055 aa22.82■■□□□ 1.24
PTBP1-220ENST00000627714 RABL6Q3YEC7 729 aaPredicted RBP22.82■■□□□ 1.24
PTBP1-220ENST00000627714 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
PTBP1-220ENST00000627714 NLRP2Q9NX02 1062 aa22.82■■□□□ 1.24
PTBP1-220ENST00000627714 KDM4AO75164 1064 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 TTC5Q8N0Z6 440 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 TAF5LO75529 589 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 ADCY5O95622 1261 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 EPHA10Q5JZY3 1008 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 LRP10Q7Z4F1 713 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
PTBP1-220ENST00000627714 DCAF5Q96JK2 942 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 C19orf44Q9H6X5 657 aa22.81■■□□□ 1.24
PTBP1-220ENST00000627714 AFDNP55196 1824 aaKnown RBP22.8■■□□□ 1.24
PTBP1-220ENST00000627714 RFX5P48382 616 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms