RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 FRAT2O75474 233 aaPredicted RBP26.84■■□□□ 1.89
PNKP-220ENST00000627232 MAP4K4O95819 1239 aaPredicted RBP26.84■■□□□ 1.89
PNKP-220ENST00000627232 DDB1Q16531 1140 aa26.84■■□□□ 1.89
PNKP-220ENST00000627232 BARGINQ6ZT62 677 aa26.84■■□□□ 1.89
PNKP-220ENST00000627232 EVI5LQ96CN4 794 aa26.84■■□□□ 1.89
PNKP-220ENST00000627232 ANO2Q9NQ90 1003 aa26.84■■□□□ 1.89
PNKP-220ENST00000627232 SGSM2O43147 1006 aa26.83■■□□□ 1.89
PNKP-220ENST00000627232 ST18O60284 1047 aa26.83■■□□□ 1.89
PNKP-220ENST00000627232 LMBR1LQ6UX01 489 aa26.83■■□□□ 1.89
PNKP-220ENST00000627232 KLHDC4Q8TBB5 520 aa26.83■■□□□ 1.89
PNKP-220ENST00000627232 ANKRD36CQ5JPF3 1778 aa26.83■■□□□ 1.89
PNKP-220ENST00000627232 CYP19A1P11511 503 aaPredicted RBP26.82■■□□□ 1.88
PNKP-220ENST00000627232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.82■■□□□ 1.88
PNKP-220ENST00000627232 KAT6BQ8WYB5 2073 aa26.82■■□□□ 1.88
PNKP-220ENST00000627232 RUFY2Q8WXA3 655 aa26.81■■□□□ 1.88
PNKP-220ENST00000627232 CICQ96RK0 1608 aaPredicted RBP26.81■■□□□ 1.88
PNKP-220ENST00000627232 MAP3K15Q6ZN16 1313 aa26.81■■□□□ 1.88
PNKP-220ENST00000627232 NUTM2BA6NNL0 878 aaPredicted RBP26.8■■□□□ 1.88
PNKP-220ENST00000627232 NUTM2EB1AL46 878 aaPredicted RBP26.8■■□□□ 1.88
PNKP-220ENST00000627232 PIP4K2BP78356 416 aa26.8■■□□□ 1.88
PNKP-220ENST00000627232 NUTM2AQ8IVF1 878 aaPredicted RBP26.8■■□□□ 1.88
PNKP-220ENST00000627232 SLC4A9Q96Q91 983 aa26.8■■□□□ 1.88
PNKP-220ENST00000627232 CCDC8Q9H0W5 538 aaPredicted RBP26.8■■□□□ 1.88
PNKP-220ENST00000627232 PRIM1P49642 420 aaKnown RBP26.8■■□□□ 1.88
PNKP-220ENST00000627232 HIP1O00291 1037 aa26.79■■□□□ 1.88
PNKP-220ENST00000627232 HSP90AA1P07900 732 aaKnown RBP26.78■■□□□ 1.88
PNKP-220ENST00000627232 HSP90AB3PQ58FF7 597 aa26.78■■□□□ 1.88
PNKP-220ENST00000627232 TNNI3KQ59H18 835 aa26.78■■□□□ 1.88
PNKP-220ENST00000627232 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
PNKP-220ENST00000627232 DIAPH3Q9NSV4 1193 aa26.78■■□□□ 1.88
PNKP-220ENST00000627232 FPGT-TNNI3KV9GXZ4 949 aa26.78■■□□□ 1.88
PNKP-220ENST00000627232 PCCAP05165 728 aaPredicted RBP26.77■■□□□ 1.88
PNKP-220ENST00000627232 TFCP2Q12800 502 aa26.77■■□□□ 1.88
PNKP-220ENST00000627232 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
PNKP-220ENST00000627232 TLR7Q9NYK1 1049 aaKnown RBP26.77■■□□□ 1.88
PNKP-220ENST00000627232 RAD50Q92878 1312 aa26.77■■□□□ 1.88
PNKP-220ENST00000627232 HSPA4P34932 840 aa26.76■■□□□ 1.87
PNKP-220ENST00000627232 PLA2G12BQ9BX93 195 aa26.76■■□□□ 1.87
PNKP-220ENST00000627232 IL25Q9H293 177 aa26.76■■□□□ 1.87
PNKP-220ENST00000627232 GPR108Q9NPR9 543 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 ZNF330Q9Y3S2 320 aaPredicted RBP26.75■■□□□ 1.87
PNKP-220ENST00000627232 RREB1Q92766 1687 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 NUP98P52948 1817 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 ATP5JP18859 108 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 IL6STP40189 918 aaPredicted RBP26.75■■□□□ 1.87
PNKP-220ENST00000627232 MCM2P49736 904 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 KIAA1211Q6ZU35 1233 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
PNKP-220ENST00000627232 LSG1Q9H089 658 aaKnown RBP26.75■■□□□ 1.87
PNKP-220ENST00000627232 CHMP3Q9Y3E7 222 aa26.75■■□□□ 1.87
PNKP-220ENST00000627232 CDHR2Q9BYE9 1310 aa26.73■■□□□ 1.87
PNKP-220ENST00000627232 CIAO1O76071 339 aa26.73■■□□□ 1.87
PNKP-220ENST00000627232 IL15P40933 162 aaPredicted RBP26.73■■□□□ 1.87
PNKP-220ENST00000627232 CWC27Q6UX04 472 aaKnown RBP26.73■■□□□ 1.87
PNKP-220ENST00000627232 ZBTB38Q8NAP3 1195 aaPredicted RBP26.73■■□□□ 1.87
PNKP-220ENST00000627232 FBXO3Q9UK99 471 aa26.73■■□□□ 1.87
PNKP-220ENST00000627232 ERVV-1B6SEH8 477 aa26.72■■□□□ 1.87
PNKP-220ENST00000627232 ATG9AQ7Z3C6 839 aa26.72■■□□□ 1.87
PNKP-220ENST00000627232 DBNLQ9UJU6 430 aaKnown RBP26.72■■□□□ 1.87
PNKP-220ENST00000627232 PALD1Q9ULE6 856 aa26.72■■□□□ 1.87
PNKP-220ENST00000627232 ZBTB1Q9Y2K1 713 aa26.72■■□□□ 1.87
PNKP-220ENST00000627232 JCADQ9P266 1359 aa26.72■■□□□ 1.87
PNKP-220ENST00000627232 UBAP1LF5GYI3 381 aa26.71■■□□□ 1.87
PNKP-220ENST00000627232 DEKP35659 375 aaKnown RBP26.71■■□□□ 1.87
PNKP-220ENST00000627232 EYA2O00167 538 aa26.7■■□□□ 1.87
PNKP-220ENST00000627232 NEK4P51957 841 aa26.7■■□□□ 1.87
PNKP-220ENST00000627232 SNRKQ9NRH2 765 aa26.7■■□□□ 1.87
PNKP-220ENST00000627232 CCDC9Q9Y3X0 531 aaKnown RBP26.7■■□□□ 1.87
PNKP-220ENST00000627232 RFX7Q2KHR2 1363 aa26.7■■□□□ 1.86
PNKP-220ENST00000627232 BOLA2Q9H3K6 86 aa26.7■■□□□ 1.86
PNKP-220ENST00000627232 MYH3P11055 1940 aa26.69■■□□□ 1.86
PNKP-220ENST00000627232 ZNF831Q5JPB2 1677 aa26.69■■□□□ 1.86
PNKP-220ENST00000627232 RAB3GAP1Q15042 981 aa26.69■■□□□ 1.86
PNKP-220ENST00000627232 CSF1RP07333 972 aa26.68■■□□□ 1.86
PNKP-220ENST00000627232 HLFQ16534 295 aa26.68■■□□□ 1.86
PNKP-220ENST00000627232 NLRP10Q86W26 655 aa26.68■■□□□ 1.86
PNKP-220ENST00000627232 CWC22Q9HCG8 908 aaKnown RBP26.68■■□□□ 1.86
PNKP-220ENST00000627232 MCM4P33991 863 aa26.67■■□□□ 1.86
PNKP-220ENST00000627232 VPS72Q15906 364 aa26.67■■□□□ 1.86
PNKP-220ENST00000627232 SMARCC1Q92922 1105 aaPredicted RBP26.66■■□□□ 1.86
PNKP-220ENST00000627232 DBNDD2Q9BQY9 259 aa26.66■■□□□ 1.86
PNKP-220ENST00000627232 FSD1Q9BTV5 496 aa26.66■■□□□ 1.86
PNKP-220ENST00000627232 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 TICAM2Q86XR7 235 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 DZIP3Q86Y13 1208 aaKnown RBP26.65■■□□□ 1.86
PNKP-220ENST00000627232 ARXQ96QS3 562 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 CCDC87Q9NVE4 849 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 ZNF609O15014 1411 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 BCL9LQ86UU0 1499 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 EIF5P55010 431 aaKnown RBP26.65■■□□□ 1.86
PNKP-220ENST00000627232 FAM89AQ96GI7 184 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 ACSBG1Q96GR2 724 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 HAUS7Q99871 368 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 FOXD4L1Q9NU39 408 aa26.65■■□□□ 1.86
PNKP-220ENST00000627232 NMIQ13287 307 aaPredicted RBP26.64■■□□□ 1.85
PNKP-220ENST00000627232 KCNB2Q92953 911 aa26.64■■□□□ 1.85
PNKP-220ENST00000627232 SNX14Q9Y5W7 946 aa26.64■■□□□ 1.85
PNKP-220ENST00000627232 CCDC171Q6TFL3 1326 aa26.63■■□□□ 1.85
PNKP-220ENST00000627232 SPEF2Q9C093 1822 aa26.63■■□□□ 1.85
PNKP-220ENST00000627232 LOC102724428A0A0B4J2F2 783 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms