RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PDGFDQ9GZP0 370 aaPredicted RBP10.79□□□□□ -0.68
SGMS1-211ENST00000626236 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
SGMS1-211ENST00000626236 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 MS4A1P11836 297 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 RLBP1P12271 317 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 GPTP24298 496 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 TCIRG1Q13488 830 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
SGMS1-211ENST00000626236 BEND3Q5T5X7 828 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 MSL1Q68DK7 614 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 TMEM57Q8N5G2 664 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 SRCIN1Q9C0H9 1055 aa10.78□□□□□ -0.68
SGMS1-211ENST00000626236 RGL2O15211 777 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 IGKV5-2P06315 115 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 CCT4P50991 539 aaKnown RBP10.77□□□□□ -0.69
SGMS1-211ENST00000626236 PDE3AQ14432 1141 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 ITPRIPQ8IWB1 547 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 ZNF34Q8IZ26 560 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 LINS1Q8NG48 757 aa10.77□□□□□ -0.69
SGMS1-211ENST00000626236 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
SGMS1-211ENST00000626236 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 INTS3Q68E01 1043 aaKnown RBP10.76□□□□□ -0.69
SGMS1-211ENST00000626236 NLGN1Q8N2Q7 840 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 SETDB2Q96T68 719 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 ISCA1Q9BUE6 129 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 CARMIL3Q8ND23 1372 aa10.76□□□□□ -0.69
SGMS1-211ENST00000626236 LAMB2P55268 1798 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 ZBTB7AO95365 584 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 IRX6P78412 446 aaPredicted RBP10.75□□□□□ -0.69
SGMS1-211ENST00000626236 MVPQ14764 893 aaKnown RBP10.75□□□□□ -0.69
SGMS1-211ENST00000626236 NFIXQ14938 502 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 PARP10Q53GL7 1025 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 NLRP10Q86W26 655 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 CCDC191Q8NCU4 936 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 SLC16A10Q8TF71 515 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 CWC25Q9NXE8 425 aaPredicted RBP10.75□□□□□ -0.69
SGMS1-211ENST00000626236 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
SGMS1-211ENST00000626236 NRXN2Q9P2S2 1712 aa10.75□□□□□ -0.69
SGMS1-211ENST00000626236 MMP10P09238 476 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 TM4SF1P30408 202 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 TRIM28Q13263 835 aaKnown RBP10.74□□□□□ -0.69
SGMS1-211ENST00000626236 GCKRQ14397 625 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 SUSD4Q5VX71 490 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 C9orf78Q9NZ63 289 aaPredicted RBP10.74□□□□□ -0.69
SGMS1-211ENST00000626236 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 MYH3P11055 1940 aa10.74□□□□□ -0.69
SGMS1-211ENST00000626236 NPHP1O15259 732 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 DDR1Q08345 913 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 RTL5Q5HYW3 569 aaPredicted RBP10.73□□□□□ -0.69
SGMS1-211ENST00000626236 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
SGMS1-211ENST00000626236 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
SGMS1-211ENST00000626236 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
SGMS1-211ENST00000626236 MTFR1LQ9H019 292 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 TRMT112Q9UI30 125 aaKnown RBP10.73□□□□□ -0.69
SGMS1-211ENST00000626236 DDX19BQ9UMR2 479 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
SGMS1-211ENST00000626236 GRM8O00222 908 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 POLRMTO00411 1230 aaKnown RBP10.72□□□□□ -0.69
SGMS1-211ENST00000626236 NTSR2O95665 410 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 SERPINB2P05120 415 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 GTF2E1P29083 439 aaPredicted RBP10.72□□□□□ -0.69
SGMS1-211ENST00000626236 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 NUTM1Q86Y26 1132 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 ZBTB38Q8NAP3 1195 aaPredicted RBP10.72□□□□□ -0.69
SGMS1-211ENST00000626236 FAM89AQ96GI7 184 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 MEIS3Q99687 375 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 NYXQ9GZU5 481 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 IBTKQ9P2D0 1353 aaPredicted RBP10.72□□□□□ -0.69
SGMS1-211ENST00000626236 TNRC6CQ9HCJ0 1690 aaKnown RBP10.72□□□□□ -0.69
SGMS1-211ENST00000626236 ANKRD31Q8N7Z5 1873 aa10.72□□□□□ -0.69
SGMS1-211ENST00000626236 H7C1W4 665 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 PCCAP05165 728 aaPredicted RBP10.71□□□□□ -0.69
SGMS1-211ENST00000626236 NEFLP07196 543 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 NBPF7P0C2Y1 421 aaPredicted RBP10.71□□□□□ -0.69
SGMS1-211ENST00000626236 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
SGMS1-211ENST00000626236 ERFEQ4G0M1 354 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 SH3TC1Q8TE82 1336 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
SGMS1-211ENST00000626236 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 ZBTB7BO15156 539 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-211ENST00000626236 GNAI3P08754 354 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-211ENST00000626236 POLD1P28340 1107 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 ST5P78524 1137 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 SYNE4Q8N205 404 aa10.7□□□□□ -0.7
SGMS1-211ENST00000626236 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms