RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 DMRTC2Q8IXT2 367 aaPredicted RBP7.49□□□□□ -1.21
VBP1-204ENST00000625964 CHMP3Q9Y3E7 222 aa7.49□□□□□ -1.21
VBP1-204ENST00000625964 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
VBP1-204ENST00000625964 GTF2IP78347 998 aa7.48□□□□□ -1.21
VBP1-204ENST00000625964 TYRO3Q06418 890 aa7.48□□□□□ -1.21
VBP1-204ENST00000625964 NUDT8Q8WV74 236 aa7.48□□□□□ -1.21
VBP1-204ENST00000625964 RGS9O75916 674 aaPredicted RBP7.47□□□□□ -1.21
VBP1-204ENST00000625964 PSME1Q06323 249 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
VBP1-204ENST00000625964 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 PCSK7Q16549 785 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 HIF1AQ16665 826 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 MSL1Q68DK7 614 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 POTEAQ6S8J7 498 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 IGF2-ASQ6U949 168 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 PRR23CQ6ZRP0 262 aa7.47□□□□□ -1.21
VBP1-204ENST00000625964 NOS3P29474 1203 aa7.46□□□□□ -1.22
VBP1-204ENST00000625964 IREB2P48200 963 aaKnown RBP7.46□□□□□ -1.22
VBP1-204ENST00000625964 IRAK1P51617 712 aa7.46□□□□□ -1.22
VBP1-204ENST00000625964 TNS4Q8IZW8 715 aa7.46□□□□□ -1.22
VBP1-204ENST00000625964 SUSD3Q96L08 255 aa7.46□□□□□ -1.22
VBP1-204ENST00000625964 NFATC2IPQ8NCF5 419 aa7.45□□□□□ -1.22
VBP1-204ENST00000625964 HSH2DQ96JZ2 352 aa7.45□□□□□ -1.22
VBP1-204ENST00000625964 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
VBP1-204ENST00000625964 DNAJB12Q9NXW2 375 aaKnown RBP7.45□□□□□ -1.22
VBP1-204ENST00000625964 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
VBP1-204ENST00000625964 SH3PXD2AQ5TCZ1 1133 aa7.44□□□□□ -1.22
VBP1-204ENST00000625964 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
VBP1-204ENST00000625964 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
VBP1-204ENST00000625964 SKIP12755 728 aa7.43□□□□□ -1.22
VBP1-204ENST00000625964 HCN4Q9Y3Q4 1203 aa7.43□□□□□ -1.22
VBP1-204ENST00000625964 TRIM50Q86XT4 487 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 GSX2Q9BZM3 304 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 FSTP19883 344 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 CD97P48960 835 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 BTLAQ7Z6A9 289 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 TTC9Q92623 222 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 NAGPAQ9UK23 515 aa7.42□□□□□ -1.22
VBP1-204ENST00000625964 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.42□□□□□ -1.22
VBP1-204ENST00000625964 ABL2P42684 1182 aa7.41□□□□□ -1.22
VBP1-204ENST00000625964 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
VBP1-204ENST00000625964 M0R2N6 131 aa7.4□□□□□ -1.22
VBP1-204ENST00000625964 SSTR4P31391 388 aa7.4□□□□□ -1.22
VBP1-204ENST00000625964 NCOA4Q13772 614 aa7.4□□□□□ -1.22
VBP1-204ENST00000625964 CCINQ13939 588 aa7.4□□□□□ -1.22
VBP1-204ENST00000625964 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
VBP1-204ENST00000625964 GSC2O15499 205 aa7.39□□□□□ -1.23
VBP1-204ENST00000625964 GRIK5Q16478 980 aa7.39□□□□□ -1.23
VBP1-204ENST00000625964 IER5Q5VY09 327 aa7.39□□□□□ -1.23
VBP1-204ENST00000625964 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
VBP1-204ENST00000625964 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
VBP1-204ENST00000625964 TAL1P17542 331 aaPredicted RBP7.38□□□□□ -1.23
VBP1-204ENST00000625964 ATP1A2P50993 1020 aa7.38□□□□□ -1.23
VBP1-204ENST00000625964 TMEM130Q8N3G9 435 aa7.38□□□□□ -1.23
VBP1-204ENST00000625964 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
VBP1-204ENST00000625964 LPIN3Q9BQK8 851 aa7.38□□□□□ -1.23
VBP1-204ENST00000625964 AKTIPQ9H8T0 292 aa7.38□□□□□ -1.23
VBP1-204ENST00000625964 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
VBP1-204ENST00000625964 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 KIAA1324LA8MWY0 1029 aaPredicted RBP7.37□□□□□ -1.23
VBP1-204ENST00000625964 NFKB1P19838 968 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 FZD5Q13467 585 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 TPCN2Q8NHX9 752 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 DCAF11Q8TEB1 546 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
VBP1-204ENST00000625964 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
VBP1-204ENST00000625964 DLL1O00548 723 aa7.36□□□□□ -1.23
VBP1-204ENST00000625964 ZBTB7BO15156 539 aaPredicted RBP7.36□□□□□ -1.23
VBP1-204ENST00000625964 CCDC102BQ68D86 513 aa7.36□□□□□ -1.23
VBP1-204ENST00000625964 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
VBP1-204ENST00000625964 PPP1R12BO60237 982 aaPredicted RBP7.35□□□□□ -1.23
VBP1-204ENST00000625964 CPB1P15086 417 aa7.35□□□□□ -1.23
VBP1-204ENST00000625964 EPB42P16452 691 aa7.35□□□□□ -1.23
VBP1-204ENST00000625964 GP2P55259 537 aaKnown RBP7.35□□□□□ -1.23
VBP1-204ENST00000625964 ELMSAN1Q6PJG2 1045 aa7.35□□□□□ -1.23
VBP1-204ENST00000625964 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
VBP1-204ENST00000625964 ALG2Q9H553 416 aa7.35□□□□□ -1.23
VBP1-204ENST00000625964 USP17L5A8MUK1 530 aa7.34□□□□□ -1.23
VBP1-204ENST00000625964 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
VBP1-204ENST00000625964 SRA1Q9HD15 236 aaKnown RBP7.34□□□□□ -1.23
VBP1-204ENST00000625964 OAS3Q9Y6K5 1087 aaKnown RBP7.34□□□□□ -1.23
VBP1-204ENST00000625964 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
VBP1-204ENST00000625964 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
VBP1-204ENST00000625964 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 ARID4AP29374 1257 aaPredicted RBP7.32□□□□□ -1.24
VBP1-204ENST00000625964 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
VBP1-204ENST00000625964 GPLD1P80108 840 aa7.32□□□□□ -1.24
VBP1-204ENST00000625964 INTS5Q6P9B9 1019 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms