RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
LINC00552-201ENST00000625151 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 SIPA1L3O60292 1781 aaPredicted RBP18.21■□□□□ 0.51
LINC00552-201ENST00000625151 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
LINC00552-201ENST00000625151 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
LINC00552-201ENST00000625151 ME3Q16798 604 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 KAZALD1Q96I82 304 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 FAM227BQ96M60 508 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 UQCRHLA0A096LP55 91 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 SASH1O94885 1247 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 UQCRHP07919 91 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
LINC00552-201ENST00000625151 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
LINC00552-201ENST00000625151 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
LINC00552-201ENST00000625151 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
LINC00552-201ENST00000625151 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
LINC00552-201ENST00000625151 PDCL3Q9H2J4 239 aa18.2■□□□□ 0.5
LINC00552-201ENST00000625151 SH2B1Q9NRF2 756 aaPredicted RBP18.2■□□□□ 0.5
LINC00552-201ENST00000625151 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
LINC00552-201ENST00000625151 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
LINC00552-201ENST00000625151 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
LINC00552-201ENST00000625151 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
LINC00552-201ENST00000625151 EAF2Q96CJ1 260 aaPredicted RBP18.2■□□□□ 0.5
LINC00552-201ENST00000625151 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
LINC00552-201ENST00000625151 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
LINC00552-201ENST00000625151 GRM8O00222 908 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 ADCY5O95622 1261 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
LINC00552-201ENST00000625151 FUCA2Q9BTY2 467 aa18.19■□□□□ 0.5
LINC00552-201ENST00000625151 CCDC8Q9H0W5 538 aaPredicted RBP18.19■□□□□ 0.5
LINC00552-201ENST00000625151 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
LINC00552-201ENST00000625151 OVOS2A0A0G2JMS6 1433 aa18.18■□□□□ 0.5
LINC00552-201ENST00000625151 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
LINC00552-201ENST00000625151 GCP02774 474 aa18.18■□□□□ 0.5
LINC00552-201ENST00000625151 TPCN1Q9ULQ1 816 aa18.18■□□□□ 0.5
LINC00552-201ENST00000625151 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
LINC00552-201ENST00000625151 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
LINC00552-201ENST00000625151 MAP4K1Q92918 833 aa18.18■□□□□ 0.5
LINC00552-201ENST00000625151 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
LINC00552-201ENST00000625151 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
LINC00552-201ENST00000625151 UTYO14607 1347 aa18.17■□□□□ 0.5
LINC00552-201ENST00000625151 KCNJ4P48050 445 aa18.17■□□□□ 0.5
LINC00552-201ENST00000625151 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
LINC00552-201ENST00000625151 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00552-201ENST00000625151 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 SIL1Q9H173 461 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 SLC27A2O14975 620 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
LINC00552-201ENST00000625151 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 CAMTA1Q9Y6Y1 1673 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 PDIA6Q15084 440 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 BOLA2Q9H3K6 86 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
LINC00552-201ENST00000625151 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 RGPD5Q99666 1765 aa18.15■□□□□ 0.5
LINC00552-201ENST00000625151 C5P01031 1676 aa18.14■□□□□ 0.5
LINC00552-201ENST00000625151 HIP1O00291 1037 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 KDM4AO75164 1064 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 IGKV5-2P06315 115 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
LINC00552-201ENST00000625151 SNRKQ9NRH2 765 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 SLIT3O75094 1523 aa18.14■□□□□ 0.49
LINC00552-201ENST00000625151 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 AP5Z1O43299 807 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 LARP1BQ659C4 914 aaKnown RBP18.13■□□□□ 0.49
LINC00552-201ENST00000625151 PIBF1Q8WXW3 757 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 FSD1Q9BTV5 496 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
LINC00552-201ENST00000625151 TTC6Q86TZ1 520 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
LINC00552-201ENST00000625151 ZC3H6P61129 1189 aaKnown RBP18.12■□□□□ 0.49
LINC00552-201ENST00000625151 FAM173BQ6P4H8 233 aa18.12■□□□□ 0.49
LINC00552-201ENST00000625151 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
LINC00552-201ENST00000625151 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
LINC00552-201ENST00000625151 PSMA5P28066 241 aa18.12■□□□□ 0.49
LINC00552-201ENST00000625151 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
LINC00552-201ENST00000625151 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
LINC00552-201ENST00000625151 BLOC1S2Q6QNY1 142 aa18.11■□□□□ 0.49
LINC00552-201ENST00000625151 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
LINC00552-201ENST00000625151 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00552-201ENST00000625151 RIC3Q7Z5B4 369 aa18.11■□□□□ 0.49
LINC00552-201ENST00000625151 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
LINC00552-201ENST00000625151 TOB2Q14106 344 aaPredicted RBP18.1■□□□□ 0.49
LINC00552-201ENST00000625151 EPHA10Q5JZY3 1008 aa18.1■□□□□ 0.49
LINC00552-201ENST00000625151 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms