RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 EPB41L2O43491 1005 aaKnown RBP17.84■□□□□ 0.45
PMS1-221ENST00000624204 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
PMS1-221ENST00000624204 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 RHPN1Q8TCX5 695 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 TSPYL1Q9H0U9 437 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.45
PMS1-221ENST00000624204 CCZ1BP86790 482 aa17.83■□□□□ 0.45
PMS1-221ENST00000624204 CCZ1P86791 482 aaPredicted RBP17.83■□□□□ 0.45
PMS1-221ENST00000624204 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.45
PMS1-221ENST00000624204 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
PMS1-221ENST00000624204 ISM2Q6H9L7 571 aa17.83■□□□□ 0.44
PMS1-221ENST00000624204 TMCO3Q6UWJ1 677 aa17.83■□□□□ 0.44
PMS1-221ENST00000624204 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
PMS1-221ENST00000624204 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.83■□□□□ 0.44
PMS1-221ENST00000624204 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.44
PMS1-221ENST00000624204 PPP1R42Q7Z4L9 355 aa17.82■□□□□ 0.44
PMS1-221ENST00000624204 EPC1Q9H2F5 836 aa17.82■□□□□ 0.44
PMS1-221ENST00000624204 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
PMS1-221ENST00000624204 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
PMS1-221ENST00000624204 GYS2P54840 703 aa17.82■□□□□ 0.44
PMS1-221ENST00000624204 MRFAP1L1Q96HT8 127 aa17.82■□□□□ 0.44
PMS1-221ENST00000624204 SRGAP3O43295 1099 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 CDC25BP30305 580 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 PLA2G4AP47712 749 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 RUFY2Q8WXA3 655 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 UBXN4Q92575 508 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 H2AFXP16104 143 aaPredicted RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 IRX3P78415 501 aaPredicted RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 CREBRFQ8IUR6 639 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 C10orf67Q8IYJ2 551 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 ZSWIM6Q9HCJ5 1215 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 ZCCHC17Q9NP64 241 aaKnown RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 ARGLU1Q9NWB6 273 aaPredicted RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
PMS1-221ENST00000624204 IQCB1Q15051 598 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
PMS1-221ENST00000624204 AOX1Q06278 1338 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 ANKRD26Q9UPS8 1709 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 CCDC34Q96HJ3 373 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
PMS1-221ENST00000624204 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 MNS1Q8NEH6 495 aa17.8■□□□□ 0.44
PMS1-221ENST00000624204 LTV1Q96GA3 475 aaPredicted RBP17.8■□□□□ 0.44
PMS1-221ENST00000624204 H3BQV1 296 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
PMS1-221ENST00000624204 TPM4P67936 248 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 GUCY1B3Q02153 619 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 IFFO2Q5TF58 517 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 ST5P78524 1137 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 AOPEPQ8N6M6 819 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 LRRC2Q9BYS8 371 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 ANXA1P04083 346 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 FAM193AP78312 1265 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 STX1AQ16623 288 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 RBM43Q6ZSC3 357 aaKnown RBP17.79■□□□□ 0.44
PMS1-221ENST00000624204 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
PMS1-221ENST00000624204 SMC2O95347 1197 aa17.78■□□□□ 0.44
PMS1-221ENST00000624204 RBM8AQ9Y5S9 174 aaKnown RBP17.78■□□□□ 0.44
PMS1-221ENST00000624204 BIN1O00499 593 aa17.78■□□□□ 0.44
PMS1-221ENST00000624204 FTOQ9C0B1 505 aaKnown RBP eCLIP17.78■□□□□ 0.44
PMS1-221ENST00000624204 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
PMS1-221ENST00000624204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.78■□□□□ 0.446e-6■■□□□ 13.3
PMS1-221ENST00000624204 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
PMS1-221ENST00000624204 PTPRMP28827 1452 aa17.77■□□□□ 0.44
PMS1-221ENST00000624204 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.44
PMS1-221ENST00000624204 SARM1Q6SZW1 724 aa17.77■□□□□ 0.44
PMS1-221ENST00000624204 CAVIN2O95810 425 aa17.77■□□□□ 0.43
PMS1-221ENST00000624204 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.43
PMS1-221ENST00000624204 SMARCE1Q969G3 411 aa17.77■□□□□ 0.43
PMS1-221ENST00000624204 PPP1R13BQ96KQ4 1090 aa17.77■□□□□ 0.43
PMS1-221ENST00000624204 RASSF4Q9H2L5 321 aa17.77■□□□□ 0.43
PMS1-221ENST00000624204 TRIM66O15016 1216 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 GPS2Q13227 327 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 E4F1Q66K89 784 aaPredicted RBP17.76■□□□□ 0.43
PMS1-221ENST00000624204 CREB3L3Q68CJ9 461 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 JAK2O60674 1132 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 URI1O94763 535 aaPredicted RBP17.76■□□□□ 0.43
PMS1-221ENST00000624204 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
PMS1-221ENST00000624204 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
PMS1-221ENST00000624204 ANKRD65E5RJM6 399 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 KINO60870 393 aaKnown RBP17.75■□□□□ 0.43
PMS1-221ENST00000624204 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
PMS1-221ENST00000624204 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 SIL1Q9H173 461 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 GLRX3O76003 335 aaKnown RBP17.75■□□□□ 0.43
PMS1-221ENST00000624204 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
PMS1-221ENST00000624204 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
PMS1-221ENST00000624204 TM6SF1Q9BZW5 370 aa17.75■□□□□ 0.43
PMS1-221ENST00000624204 POGZQ7Z3K3 1410 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms