RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ZBED2Q9BTP6 218 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 TXNDC16Q9P2K2 825 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 MAP2K1Q02750 393 aaPredicted RBP7.21□□□□□ -1.25
CDKL5-205ENST00000623535 SLC4A8Q2Y0W8 1093 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 ARHGAP27Q6ZUM4 889 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 FMNL3Q8IVF7 1028 aa7.21□□□□□ -1.25
CDKL5-205ENST00000623535 RNF34Q969K3 372 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 SRGAP2BP0DMP2 458 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 ATP6V1AP38606 617 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 PUS7Q96PZ0 661 aaKnown RBP7.21□□□□□ -1.26
CDKL5-205ENST00000623535 CCT6AP40227 531 aaKnown RBP7.21□□□□□ -1.26
CDKL5-205ENST00000623535 ATP2B3Q16720 1220 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC114Q96M63 670 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 FANCD2Q9BXW9 1451 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 TTLL7Q6ZT98 887 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 ARID3AQ99856 593 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 FAM135AQ9P2D6 1515 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 F8W8V4 182 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 C6orf163Q5TEZ5 329 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 ARHGEF10LQ9HCE6 1279 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 NUDT18Q6ZVK8 323 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 IFT57Q9NWB7 429 aa7.21□□□□□ -1.26
CDKL5-205ENST00000623535 MYBBP1AQ9BQG0 1328 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 CRCPO75575 148 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 NFKBIBQ15653 356 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 IQCGQ9H095 443 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 CENPHQ9H3R5 247 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 PFDN4Q9NQP4 134 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 G3BP2Q9UN86 482 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 CCNA1P78396 465 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 ANAPC4Q9UJX5 808 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 BACH1O14867 736 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 SRGAP3O43295 1099 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 XPAP23025 273 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 PRPHP41219 470 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 TRAPPC3LQ5T215 181 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 MCF2L2Q86YR7 1114 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 FMNL2Q96PY5 1086 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 SEPT10Q9P0V9 454 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 BCCIPQ9P287 314 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 USP8P40818 1118 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 CFAP45Q9UL16 551 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 PFDN6O15212 129 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 RRP1P56182 461 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 PANK3Q9H999 370 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 NCOA2Q15596 1464 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 MAP4K4O95819 1239 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 RAB3IPQ96QF0 476 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 AZI2Q9H6S1 392 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 TSPY3P0CV98 308 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 TSPY8P0CW00 308 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 KCNG1Q9UIX4 513 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 TPCN1Q9ULQ1 816 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 ECM2O94769 699 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 STK10O94804 968 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 PSPC1Q8WXF1 523 aaKnown RBP7.2□□□□□ -1.26
CDKL5-205ENST00000623535 C16orf72Q14CZ0 275 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 GAPVD1Q14C86 1478 aa7.2□□□□□ -1.26
CDKL5-205ENST00000623535 OATP04181 439 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 MAP7Q14244 749 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 RIOK1Q9BRS2 568 aaKnown RBP7.19□□□□□ -1.26
CDKL5-205ENST00000623535 CGNQ9P2M7 1197 aaKnown RBP7.19□□□□□ -1.26
CDKL5-205ENST00000623535 TSPY2A6NKD2 308 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 GOLGA8CPA6NN73 597 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 KIF5CO60282 957 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 CYP46A1Q9Y6A2 500 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
CDKL5-205ENST00000623535 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ARHGEF37A1IGU5 675 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 DCAF15Q66K64 600 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ATP2A1O14983 1001 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 PDE6AP16499 860 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 SIL1Q9H173 461 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 GNAT3A8MTJ3 354 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 FAM47CQ5HY64 1035 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 C22orf23Q9BZE7 217 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ITM2BQ9Y287 266 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ME1P48163 572 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 GNAQP50148 359 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ODR4Q5SWX8 454 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC129Q6ZRS4 1044 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC148Q8NFR7 591 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 PLCD4Q9BRC7 762 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ZSCAN16Q9H4T2 348 aaPredicted RBP7.19□□□□□ -1.26
CDKL5-205ENST00000623535 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ANKRD2Q9GZV1 360 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 RPGRIP1LQ68CZ1 1315 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 PPFIBP2Q8ND30 876 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 ZBED9Q6R2W3 1325 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 SRGAP1Q7Z6B7 1085 aa7.19□□□□□ -1.26
CDKL5-205ENST00000623535 SATB1Q01826 763 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms