RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 NMIQ13287 307 aaPredicted RBP21.41■■□□□ 1.02
ZNF48-206ENST00000622647 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 CARD10Q9BWT7 1032 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 BTG4Q9NY30 223 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 PRPF40AO75400 957 aaKnown RBP21.4■■□□□ 1.02
ZNF48-206ENST00000622647 ADCK5Q3MIX3 580 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 GAS2L3Q86XJ1 694 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 EVI5LQ96CN4 794 aa21.4■■□□□ 1.02
ZNF48-206ENST00000622647 RFX5P48382 616 aaPredicted RBP21.39■■□□□ 1.01
ZNF48-206ENST00000622647 L1TD1Q5T7N2 865 aaKnown RBP21.39■■□□□ 1.01
ZNF48-206ENST00000622647 CCDC85AQ96PX6 553 aaPredicted RBP21.39■■□□□ 1.01
ZNF48-206ENST00000622647 CASTP20810 708 aaKnown RBP21.39■■□□□ 1.01
ZNF48-206ENST00000622647 KCNJ4P48050 445 aa21.39■■□□□ 1.01
ZNF48-206ENST00000622647 TPRNQ4KMQ1 711 aa21.39■■□□□ 1.01
ZNF48-206ENST00000622647 COL9A3Q14050 684 aaPredicted RBP21.38■■□□□ 1.01
ZNF48-206ENST00000622647 ASAP1Q9ULH1 1129 aa21.38■■□□□ 1.01
ZNF48-206ENST00000622647 MRC1P22897 1456 aa21.38■■□□□ 1.01
ZNF48-206ENST00000622647 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
ZNF48-206ENST00000622647 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
ZNF48-206ENST00000622647 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
ZNF48-206ENST00000622647 ZNF594Q96JF6 807 aaPredicted RBP21.38■■□□□ 1.01
ZNF48-206ENST00000622647 DBNLQ9UJU6 430 aaKnown RBP21.38■■□□□ 1.01
ZNF48-206ENST00000622647 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
ZNF48-206ENST00000622647 AK2P54819 239 aa21.37■■□□□ 1.01
ZNF48-206ENST00000622647 RUFY2Q8WXA3 655 aa21.37■■□□□ 1.01
ZNF48-206ENST00000622647 DNAJC2Q99543 621 aaKnown RBP21.37■■□□□ 1.01
ZNF48-206ENST00000622647 DBNDD2Q9BQY9 259 aa21.37■■□□□ 1.01
ZNF48-206ENST00000622647 MCM2P49736 904 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
ZNF48-206ENST00000622647 A0A0G2JS52 829 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 TNNI3KQ59H18 835 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 COPRSQ9NQ92 184 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 FPGT-TNNI3KV9GXZ4 949 aa21.36■■□□□ 1.01
ZNF48-206ENST00000622647 CASP7P55210 303 aa21.35■■□□□ 1.01
ZNF48-206ENST00000622647 NEUROD6Q96NK8 337 aa21.35■■□□□ 1.01
ZNF48-206ENST00000622647 CUL4AQ13619 759 aa21.35■■□□□ 1.01
ZNF48-206ENST00000622647 TCEANC2Q96MN5 208 aa21.35■■□□□ 1.01
ZNF48-206ENST00000622647 LMBRD1Q9NUN5 540 aa21.35■■□□□ 1.01
ZNF48-206ENST00000622647 SKOR2Q2VWA4 1001 aaPredicted RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 CWC25Q9NXE8 425 aaPredicted RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 FOXO4P98177 505 aa21.34■■□□□ 1.01
ZNF48-206ENST00000622647 CAVIN1Q6NZI2 390 aaKnown RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 RUFY3Q7L099 469 aa21.34■■□□□ 1.01
ZNF48-206ENST00000622647 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
ZNF48-206ENST00000622647 RBM8AQ9Y5S9 174 aaKnown RBP21.34■■□□□ 1.01
ZNF48-206ENST00000622647 TAF6LQ9Y6J9 622 aa21.34■■□□□ 1.01
ZNF48-206ENST00000622647 LARGE1O95461 756 aa21.33■■□□□ 1.01
ZNF48-206ENST00000622647 SLFNL1Q499Z3 407 aa21.33■■□□□ 1.01
ZNF48-206ENST00000622647 RBM27Q9P2N5 1060 aaKnown RBP21.33■■□□□ 1.01
ZNF48-206ENST00000622647 TIMM10P62072 90 aa21.33■■□□□ 1.01
ZNF48-206ENST00000622647 CLEC17AQ6ZS10 378 aa21.33■■□□□ 1.01
ZNF48-206ENST00000622647 ZNF589Q86UQ0 364 aaPredicted RBP21.33■■□□□ 1.01
ZNF48-206ENST00000622647 PIGBQ92521 554 aa21.33■■□□□ 1.01
ZNF48-206ENST00000622647 RABL6Q3YEC7 729 aaPredicted RBP21.32■■□□□ 1
ZNF48-206ENST00000622647 GRPEL1Q9HAV7 217 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 GDPD2Q9HCC8 539 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 CCDC171Q6TFL3 1326 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
ZNF48-206ENST00000622647 DDX46Q7L014 1031 aaKnown RBP21.32■■□□□ 1
ZNF48-206ENST00000622647 H7C1W4 665 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 LRRC24Q50LG9 513 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 CCDC129Q6ZRS4 1044 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 TTC14Q96N46 770 aa21.32■■□□□ 1
ZNF48-206ENST00000622647 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
ZNF48-206ENST00000622647 NSFL1CQ9UNZ2 370 aaKnown RBP21.32■■□□□ 1
ZNF48-206ENST00000622647 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
ZNF48-206ENST00000622647 GLI3P10071 1580 aa21.3■■□□□ 1
ZNF48-206ENST00000622647 CREB3L3Q68CJ9 461 aa21.3■■□□□ 1
ZNF48-206ENST00000622647 SYNE4Q8N205 404 aa21.3■■□□□ 1
ZNF48-206ENST00000622647 PUS3Q9BZE2 481 aaKnown RBP21.3■■□□□ 1
ZNF48-206ENST00000622647 KLHL40Q2TBA0 621 aa21.3■■□□□ 1
ZNF48-206ENST00000622647 PDRG1Q9NUG6 133 aa21.3■■□□□ 1
ZNF48-206ENST00000622647 NECTIN1Q15223 517 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 CCDC83Q8IWF9 413 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 GPT2Q8TD30 523 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 ABCC6O95255 1503 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 BRD1O95696 1058 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 FAM89AQ96GI7 184 aa21.29■■□□□ 1
ZNF48-206ENST00000622647 PARP4Q9UKK3 1724 aaKnown RBP21.28■■□□□ 1
ZNF48-206ENST00000622647 GPTP24298 496 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 NECAB1Q8N987 351 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 PTMSP20962 102 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 IL17RAQ96F46 866 aa21.28■■□□□ 1
ZNF48-206ENST00000622647 MRE11P49959 708 aa21.27■■□□□ 1
ZNF48-206ENST00000622647 ATG9AQ7Z3C6 839 aa21.27■■□□□ 1
ZNF48-206ENST00000622647 INTS4Q96HW7 963 aaKnown RBP21.27■■□□□ 1
ZNF48-206ENST00000622647 SLC27A2O14975 620 aa21.27■■□□□ 1
ZNF48-206ENST00000622647 ATG3Q9NT62 314 aa21.27■■□□□ 1
ZNF48-206ENST00000622647 CYP46A1Q9Y6A2 500 aa21.27■■□□□ 1
ZNF48-206ENST00000622647 ZKSCAN1P17029 563 aaPredicted RBP21.26■□□□□ 0.99
ZNF48-206ENST00000622647 ATP5JP18859 108 aa21.26■□□□□ 0.99
ZNF48-206ENST00000622647 MAP4K1Q92918 833 aa21.26■□□□□ 0.99
ZNF48-206ENST00000622647 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
ZNF48-206ENST00000622647 ADAMTS2O95450 1211 aa21.25■□□□□ 0.99
ZNF48-206ENST00000622647 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms