RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 H7C1W4 665 aa18.21■□□□□ 0.51
GTF3C2-214ENST00000622534 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
GTF3C2-214ENST00000622534 AFDNP55196 1824 aaKnown RBP18.21■□□□□ 0.51
GTF3C2-214ENST00000622534 UBN2Q6ZU65 1347 aa18.2■□□□□ 0.5
GTF3C2-214ENST00000622534 GYS1P13807 737 aa18.2■□□□□ 0.5
GTF3C2-214ENST00000622534 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
GTF3C2-214ENST00000622534 NIP7Q9Y221 180 aaKnown RBP eCLIP18.2■□□□□ 0.5
GTF3C2-214ENST00000622534 GNAI2P04899 355 aa18.19■□□□□ 0.5
GTF3C2-214ENST00000622534 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
GTF3C2-214ENST00000622534 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
GTF3C2-214ENST00000622534 GPTP24298 496 aa18.19■□□□□ 0.5
GTF3C2-214ENST00000622534 CASP7P55210 303 aa18.19■□□□□ 0.5
GTF3C2-214ENST00000622534 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
GTF3C2-214ENST00000622534 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
GTF3C2-214ENST00000622534 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
GTF3C2-214ENST00000622534 PPP1R42Q7Z4L9 355 aa18.18■□□□□ 0.5
GTF3C2-214ENST00000622534 COL24A1Q17RW2 1714 aa18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
GTF3C2-214ENST00000622534 TM4SF1P30408 202 aa18.16■□□□□ 0.5
GTF3C2-214ENST00000622534 NTSR2O95665 410 aa18.16■□□□□ 0.5
GTF3C2-214ENST00000622534 RPAP2Q8IXW5 612 aaPredicted RBP18.16■□□□□ 0.5
GTF3C2-214ENST00000622534 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
GTF3C2-214ENST00000622534 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 NFIXQ14938 502 aa18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 TRMT112Q9UI30 125 aaKnown RBP18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
GTF3C2-214ENST00000622534 MSH5O43196 834 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 SLC16A10Q8TF71 515 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 MTX1Q13505 466 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 ANKRD44Q8N8A2 993 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 SUCLG2Q96I99 432 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
GTF3C2-214ENST00000622534 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
GTF3C2-214ENST00000622534 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 RABL6Q3YEC7 729 aaPredicted RBP18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
GTF3C2-214ENST00000622534 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
GTF3C2-214ENST00000622534 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 FOXO4P98177 505 aa18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 RIC1Q4ADV7 1423 aa18.1■□□□□ 0.49
GTF3C2-214ENST00000622534 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 RWDD1Q9H446 243 aaPredicted RBP18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 LAMB2P55268 1798 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 PDE8AO60658 829 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 DDR1Q08345 913 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 EPHA10Q5JZY3 1008 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
GTF3C2-214ENST00000622534 HMMRO75330 724 aa18.08■□□□□ 0.49
GTF3C2-214ENST00000622534 SERPINB2P05120 415 aa18.08■□□□□ 0.49
GTF3C2-214ENST00000622534 CSF1RP07333 972 aa18.08■□□□□ 0.49
GTF3C2-214ENST00000622534 POLA2Q14181 598 aa18.08■□□□□ 0.49
GTF3C2-214ENST00000622534 SSH3Q8TE77 659 aa18.08■□□□□ 0.49
GTF3C2-214ENST00000622534 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
GTF3C2-214ENST00000622534 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 ERFEQ4G0M1 354 aa18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 RTL5Q5HYW3 569 aaPredicted RBP18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
GTF3C2-214ENST00000622534 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 MMP10P09238 476 aa18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 CTSWP56202 376 aa18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 PARP3Q9Y6F1 533 aa18.06■□□□□ 0.48
GTF3C2-214ENST00000622534 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 IGHDP01880 384 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 R3HDM1Q15032 1099 aaKnown RBP18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 LMBR1LQ6UX01 489 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 KDM2BQ8NHM5 1336 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 RTL9Q8NET4 1388 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 TTLL11Q8NHH1 800 aa18.05■□□□□ 0.48
GTF3C2-214ENST00000622534 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
GTF3C2-214ENST00000622534 ST5P78524 1137 aa18.04■□□□□ 0.48
GTF3C2-214ENST00000622534 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
GTF3C2-214ENST00000622534 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
GTF3C2-214ENST00000622534 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
GTF3C2-214ENST00000622534 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms