RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 JARID2Q92833 1246 aaPredicted RBP13.31□□□□□ -0.28
CPNE3-212ENST00000621783 KAZALD1Q96I82 304 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 UBN2Q6ZU65 1347 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 LAMB2P55268 1798 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 RGL2O15211 777 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 PHF14O94880 888 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 MTX1Q13505 466 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
CPNE3-212ENST00000621783 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
CPNE3-212ENST00000621783 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-212ENST00000621783 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
CPNE3-212ENST00000621783 POLA2Q14181 598 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
CPNE3-212ENST00000621783 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
CPNE3-212ENST00000621783 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
CPNE3-212ENST00000621783 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
CPNE3-212ENST00000621783 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
CPNE3-212ENST00000621783 DCTPP1Q9H773 170 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
CPNE3-212ENST00000621783 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.28
CPNE3-212ENST00000621783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
CPNE3-212ENST00000621783 SSFA2P28290 1259 aa13.27□□□□□ -0.29
CPNE3-212ENST00000621783 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-212ENST00000621783 PARP10Q53GL7 1025 aa13.27□□□□□ -0.29
CPNE3-212ENST00000621783 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
CPNE3-212ENST00000621783 TRAPPC3LQ5T215 181 aa13.27□□□□□ -0.29
CPNE3-212ENST00000621783 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CPNE3-212ENST00000621783 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
CPNE3-212ENST00000621783 EP400Q96L91 3159 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 ZPR1O75312 459 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
CPNE3-212ENST00000621783 RFC4P35249 363 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 FOXO4P98177 505 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 NUCB1Q02818 461 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
CPNE3-212ENST00000621783 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
CPNE3-212ENST00000621783 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
CPNE3-212ENST00000621783 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 NTSR2O95665 410 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
CPNE3-212ENST00000621783 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
CPNE3-212ENST00000621783 EXOC6BQ9Y2D4 811 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 MYH3P11055 1940 aa13.25□□□□□ -0.29
CPNE3-212ENST00000621783 BAG6P46379 1132 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 SYNE4Q8N205 404 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 UTP14AQ9BVJ6 771 aaKnown RBP13.24□□□□□ -0.29
CPNE3-212ENST00000621783 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
CPNE3-212ENST00000621783 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 IRS4O14654 1257 aaPredicted RBP13.23□□□□□ -0.29
CPNE3-212ENST00000621783 PDE4AP27815 886 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 RGS3P49796 1198 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
CPNE3-212ENST00000621783 LRP5O75197 1615 aa13.23□□□□□ -0.29
CPNE3-212ENST00000621783 APBB1O00213 710 aa13.22□□□□□ -0.29
CPNE3-212ENST00000621783 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
CPNE3-212ENST00000621783 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
CPNE3-212ENST00000621783 CTSWP56202 376 aa13.22□□□□□ -0.29
CPNE3-212ENST00000621783 DEFB132Q7Z7B7 95 aa13.22□□□□□ -0.29
CPNE3-212ENST00000621783 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CPNE3-212ENST00000621783 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
CPNE3-212ENST00000621783 CHMP3Q9Y3E7 222 aa13.22□□□□□ -0.29
CPNE3-212ENST00000621783 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 ABCC12Q96J65 1359 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 PDE8AO60658 829 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 RAB11FIP3O75154 756 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 GYS1P13807 737 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
CPNE3-212ENST00000621783 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
CPNE3-212ENST00000621783 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.3
CPNE3-212ENST00000621783 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
CPNE3-212ENST00000621783 CSF1RP07333 972 aa13.2□□□□□ -0.3
CPNE3-212ENST00000621783 NFIXQ14938 502 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms