RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 LTBP3Q9NS15 1303 aa37.54■■■■□ 3.6
SEMA3B-215ENST00000621029 TOMM70O94826 608 aa37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 ANKRD13DQ6ZTN6 518 aa37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 NLRP10Q86W26 655 aa37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 PLBD2Q8NHP8 589 aa37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 NLRP3Q96P20 1036 aa37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 TNRC6CQ9HCJ0 1690 aaKnown RBP37.52■■■■□ 3.6
SEMA3B-215ENST00000621029 OLFM4Q6UX06 510 aa37.51■■■■□ 3.6
SEMA3B-215ENST00000621029 RBM17Q96I25 401 aaKnown RBP37.51■■■■□ 3.6
SEMA3B-215ENST00000621029 CCDC27Q2M243 656 aa37.5■■■■□ 3.59
SEMA3B-215ENST00000621029 WWC1Q8IX03 1113 aa37.5■■■■□ 3.59
SEMA3B-215ENST00000621029 C8orf58Q8NAV2 365 aa37.5■■■■□ 3.59
SEMA3B-215ENST00000621029 TRMT112Q9UI30 125 aaKnown RBP37.5■■■■□ 3.59
SEMA3B-215ENST00000621029 GLTPD2A6NH11 291 aa37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 DPY19L2Q6NUT2 758 aa37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 RTKN2Q8IZC4 609 aa37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 ZNF428Q96B54 188 aa37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 SALL2Q9Y467 1007 aaPredicted RBP37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 RIC1Q4ADV7 1423 aa37.49■■■■□ 3.59
SEMA3B-215ENST00000621029 ARFGEF2Q9Y6D5 1785 aa37.48■■■■□ 3.59
SEMA3B-215ENST00000621029 TSR2Q969E8 191 aaKnown RBP37.48■■■■□ 3.59
SEMA3B-215ENST00000621029 RNF123Q5XPI4 1314 aa37.47■■■■□ 3.59
SEMA3B-215ENST00000621029 HOXA10P31260 410 aaPredicted RBP37.47■■■■□ 3.59
SEMA3B-215ENST00000621029 C3orf67Q6ZVT6 689 aa37.47■■■■□ 3.59
SEMA3B-215ENST00000621029 FER1L6Q2WGJ9 1857 aa37.47■■■■□ 3.59
SEMA3B-215ENST00000621029 FKBP4Q02790 459 aaKnown RBP eCLIP37.46■■■■□ 3.59
SEMA3B-215ENST00000621029 CHMP4AQ9BY43 222 aa37.46■■■■□ 3.59
SEMA3B-215ENST00000621029 TCERG1O14776 1098 aaKnown RBP37.45■■■■□ 3.59
SEMA3B-215ENST00000621029 GOLGA2Q08379 1002 aa37.45■■■■□ 3.59
SEMA3B-215ENST00000621029 SLC10A5Q5PT55 438 aa37.45■■■■□ 3.59
SEMA3B-215ENST00000621029 CCDC88AQ3V6T2 1871 aa37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 HCLS1P14317 486 aaPredicted RBP37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 RIC3Q7Z5B4 369 aa37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 FAM9BQ8IZU0 186 aa37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 CRAMP1Q96RY5 1269 aa37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 ZNF277Q9NRM2 450 aaPredicted RBP37.44■■■■□ 3.58
SEMA3B-215ENST00000621029 SH3TC1Q8TE82 1336 aa37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 ATP5J2-PTCD1G3V325 749 aa37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 HSPA6P17066 643 aa37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 CCDC30Q5VVM6 783 aa37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 PHAXQ9H814 394 aaKnown RBP37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 TIAM2Q8IVF5 1701 aa37.43■■■■□ 3.58
SEMA3B-215ENST00000621029 SYNE4Q8N205 404 aa37.42■■■■□ 3.58
SEMA3B-215ENST00000621029 TMX4Q9H1E5 349 aaPredicted RBP37.41■■■■□ 3.58
SEMA3B-215ENST00000621029 PPEF1O14829 653 aaPredicted RBP37.4■■■■□ 3.58
SEMA3B-215ENST00000621029 VEGFAP15692 232 aaPredicted RBP37.4■■■■□ 3.58
SEMA3B-215ENST00000621029 CC2D2BQ6DHV5 1058 aa37.4■■■■□ 3.58
SEMA3B-215ENST00000621029 TSPYL6Q8N831 410 aa37.4■■■■□ 3.58
SEMA3B-215ENST00000621029 RBM46Q8TBY0 533 aaKnown RBP37.4■■■■□ 3.58
SEMA3B-215ENST00000621029 ANKRD36CQ5JPF3 1778 aa37.39■■■■□ 3.58
SEMA3B-215ENST00000621029 ISCA1Q9BUE6 129 aa37.38■■■■□ 3.57
SEMA3B-215ENST00000621029 IL16Q14005 1332 aa37.37■■■■□ 3.57
SEMA3B-215ENST00000621029 NCBP3Q53F19 620 aaKnown RBP37.37■■■■□ 3.57
SEMA3B-215ENST00000621029 FAM89AQ96GI7 184 aa37.35■■■■□ 3.57
SEMA3B-215ENST00000621029 STK31Q9BXU1 1019 aa37.35■■■■□ 3.57
SEMA3B-215ENST00000621029 DDX58O95786 925 aaKnown RBP37.34■■■■□ 3.57
SEMA3B-215ENST00000621029 IARSP41252 1262 aaKnown RBP37.34■■■■□ 3.57
SEMA3B-215ENST00000621029 RTL5Q5HYW3 569 aaPredicted RBP37.34■■■■□ 3.57
SEMA3B-215ENST00000621029 DDNO94850 711 aaPredicted RBP37.33■■■■□ 3.57
SEMA3B-215ENST00000621029 TWISTNBQ3B726 338 aaPredicted RBP37.33■■■■□ 3.57
SEMA3B-215ENST00000621029 DDX46Q7L014 1031 aaKnown RBP37.33■■■■□ 3.57
SEMA3B-215ENST00000621029 PSMD1Q99460 953 aa37.33■■■■□ 3.57
SEMA3B-215ENST00000621029 ABCC4O15439 1325 aa37.33■■■■□ 3.57
SEMA3B-215ENST00000621029 GRIPAP1Q4V328 841 aa37.32■■■■□ 3.56
SEMA3B-215ENST00000621029 MYD88Q99836 296 aa37.32■■■■□ 3.56
SEMA3B-215ENST00000621029 DICER1Q9UPY3 1922 aaKnown RBP37.3■■■■□ 3.56
SEMA3B-215ENST00000621029 FSTL1Q12841 308 aa37.3■■■■□ 3.56
SEMA3B-215ENST00000621029 WDR63Q8IWG1 891 aa37.3■■■■□ 3.56
SEMA3B-215ENST00000621029 TRIM28Q13263 835 aaKnown RBP37.29■■■■□ 3.56
SEMA3B-215ENST00000621029 SLC51AQ86UW1 340 aa37.29■■■■□ 3.56
SEMA3B-215ENST00000621029 JDP2Q8WYK2 163 aa37.29■■■■□ 3.56
SEMA3B-215ENST00000621029 BBOX1O75936 387 aa37.28■■■■□ 3.56
SEMA3B-215ENST00000621029 SMC1BQ8NDV3 1235 aa37.28■■■■□ 3.56
SEMA3B-215ENST00000621029 ATP6V0A2Q9Y487 856 aa37.28■■■■□ 3.56
SEMA3B-215ENST00000621029 FANCIQ9NVI1 1328 aa37.27■■■■□ 3.56
SEMA3B-215ENST00000621029 POTECB2RU33 542 aa37.25■■■■□ 3.55
SEMA3B-215ENST00000621029 IRS4O14654 1257 aaPredicted RBP37.25■■■■□ 3.55
SEMA3B-215ENST00000621029 APLP1P51693 650 aa37.25■■■■□ 3.55
SEMA3B-215ENST00000621029 GRAPQ13588 217 aa37.24■■■■□ 3.55
SEMA3B-215ENST00000621029 LARGE2Q8N3Y3 721 aa37.24■■■■□ 3.55
SEMA3B-215ENST00000621029 GRAPLQ8TC17 118 aaPredicted RBP37.24■■■■□ 3.55
SEMA3B-215ENST00000621029 MAP3K2Q9Y2U5 619 aa37.24■■■■□ 3.55
SEMA3B-215ENST00000621029 ZNF541Q9H0D2 1346 aa37.24■■■■□ 3.55
SEMA3B-215ENST00000621029 SLC4A2P04920 1241 aa37.23■■■■□ 3.55
SEMA3B-215ENST00000621029 SNED1Q8TER0 1413 aa37.23■■■■□ 3.55
SEMA3B-215ENST00000621029 METTL22Q9BUU2 404 aaPredicted RBP37.23■■■■□ 3.55
SEMA3B-215ENST00000621029 ZBTB38Q8NAP3 1195 aaPredicted RBP37.22■■■■□ 3.55
SEMA3B-215ENST00000621029 CCDC191Q8NCU4 936 aa37.22■■■■□ 3.55
SEMA3B-215ENST00000621029 CWC25Q9NXE8 425 aaPredicted RBP37.22■■■■□ 3.55
SEMA3B-215ENST00000621029 KSR2Q6VAB6 950 aa37.21■■■■□ 3.55
SEMA3B-215ENST00000621029 SP8Q8IXZ3 490 aa37.21■■■■□ 3.55
SEMA3B-215ENST00000621029 WDR90Q96KV7 1748 aa37.21■■■■□ 3.55
SEMA3B-215ENST00000621029 PI4KAP2A4QPH2 592 aa37.2■■■■□ 3.55
SEMA3B-215ENST00000621029 HSP90B1P14625 803 aaKnown RBP37.2■■■■□ 3.55
SEMA3B-215ENST00000621029 DPP8Q6V1X1 898 aaPredicted RBP37.2■■■■□ 3.55
SEMA3B-215ENST00000621029 PI4KAP1Q8N8J0 262 aa37.2■■■■□ 3.55
SEMA3B-215ENST00000621029 IQCA1LA6NCM1 817 aa37.19■■■■□ 3.54
SEMA3B-215ENST00000621029 FZD9O00144 591 aa37.19■■■■□ 3.54
SEMA3B-215ENST00000621029 EIF6P56537 245 aaKnown RBP37.19■■■■□ 3.54
SEMA3B-215ENST00000621029 SF3B3Q15393 1217 aaKnown RBP37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms