RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 SLX4Q8IY92 1834 aa13.84□□□□□ -0.19
TARDBP-223ENST00000620632 NPHP1O15259 732 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 ST5P78524 1137 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 KSR2Q6VAB6 950 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
TARDBP-223ENST00000620632 CHD4Q14839 1912 aa13.83□□□□□ -0.2
TARDBP-223ENST00000620632 RIC1Q4ADV7 1423 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 F6X3S4 739 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
TARDBP-223ENST00000620632 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
TARDBP-223ENST00000620632 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
TARDBP-223ENST00000620632 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
TARDBP-223ENST00000620632 NYXQ9GZU5 481 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 MYH3P11055 1940 aa13.82□□□□□ -0.2
TARDBP-223ENST00000620632 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-223ENST00000620632 TRIM28Q13263 835 aaKnown RBP13.81□□□□□ -0.2
TARDBP-223ENST00000620632 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
TARDBP-223ENST00000620632 COL4A1P02462 1669 aa13.81□□□□□ -0.2
TARDBP-223ENST00000620632 SRGNP10124 158 aa13.8□□□□□ -0.2
TARDBP-223ENST00000620632 PDE6BP35913 854 aa13.8□□□□□ -0.2
TARDBP-223ENST00000620632 GPR162Q16538 588 aa13.8□□□□□ -0.2
TARDBP-223ENST00000620632 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
TARDBP-223ENST00000620632 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
TARDBP-223ENST00000620632 H0YIN7 160 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 JARID2Q92833 1246 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 TRMT112Q9UI30 125 aaKnown RBP13.79□□□□□ -0.2
TARDBP-223ENST00000620632 BCS1LQ9Y276 419 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
TARDBP-223ENST00000620632 SBF1O95248 1867 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 NEURL1BA8MQ27 555 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-223ENST00000620632 CRY2Q49AN0 593 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 ZNF622Q969S3 477 aaKnown RBP eCLIP13.78□□□□□ -0.23e-23■□□□□ 9.1
TARDBP-223ENST00000620632 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
TARDBP-223ENST00000620632 DALRD3Q5D0E6 543 aaKnown RBP13.77□□□□□ -0.21
TARDBP-223ENST00000620632 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
TARDBP-223ENST00000620632 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
TARDBP-223ENST00000620632 MASTLQ96GX5 879 aa13.77□□□□□ -0.21
TARDBP-223ENST00000620632 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-223ENST00000620632 BCAR3O75815 825 aa13.76□□□□□ -0.21
TARDBP-223ENST00000620632 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
TARDBP-223ENST00000620632 TTLL6Q8N841 843 aa13.76□□□□□ -0.21
TARDBP-223ENST00000620632 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-223ENST00000620632 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
TARDBP-223ENST00000620632 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
TARDBP-223ENST00000620632 PTPRCP08575 1304 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-223ENST00000620632 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-223ENST00000620632 NPR1P16066 1061 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-223ENST00000620632 CASP7P55210 303 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 GCKRQ14397 625 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
TARDBP-223ENST00000620632 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
TARDBP-223ENST00000620632 PRPF40BQ6NWY9 871 aaKnown RBP13.74□□□□□ -0.21
TARDBP-223ENST00000620632 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
TARDBP-223ENST00000620632 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
TARDBP-223ENST00000620632 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
TARDBP-223ENST00000620632 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
TARDBP-223ENST00000620632 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 H7C1W4 665 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 GRIN3BO60391 1043 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-223ENST00000620632 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-223ENST00000620632 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
TARDBP-223ENST00000620632 ABCC4O15439 1325 aa13.72□□□□□ -0.21
TARDBP-223ENST00000620632 C21orf2O43822 256 aa13.72□□□□□ -0.21
TARDBP-223ENST00000620632 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
TARDBP-223ENST00000620632 RPGRQ92834 1020 aaKnown RBP13.72□□□□□ -0.21
TARDBP-223ENST00000620632 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
TARDBP-223ENST00000620632 PRELPP51888 382 aa13.71□□□□□ -0.21
TARDBP-223ENST00000620632 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
TARDBP-223ENST00000620632 NFKBIEO00221 500 aa13.7□□□□□ -0.22
TARDBP-223ENST00000620632 PDE8AO60658 829 aa13.7□□□□□ -0.22
TARDBP-223ENST00000620632 ALDH1L1O75891 902 aa13.7□□□□□ -0.22
TARDBP-223ENST00000620632 RASSF7Q02833 373 aa13.7□□□□□ -0.22
TARDBP-223ENST00000620632 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
TARDBP-223ENST00000620632 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms