RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 NDUFB9Q9Y6M9 179 aa23.41■■□□□ 1.34
LAPTM4B-204ENST00000619747 SGSM2O43147 1006 aa23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 FOXD4L5Q5VV16 416 aaPredicted RBP23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 FOXD4L4Q8WXT5 416 aaPredicted RBP23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 LARP6Q9BRS8 491 aaKnown RBP23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 MRC1P22897 1456 aa23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 CIZ1Q9ULV3 898 aaPredicted RBP23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 TTC41PQ6P2S7 1318 aa23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 EDC3Q96F86 508 aaKnown RBP23.4■■□□□ 1.34
LAPTM4B-204ENST00000619747 GPATCH3Q96I76 525 aa23.39■■□□□ 1.34
LAPTM4B-204ENST00000619747 TUBGCP6Q96RT7 1819 aa23.39■■□□□ 1.33
LAPTM4B-204ENST00000619747 PRDM10Q9NQV6 1147 aa23.39■■□□□ 1.33
LAPTM4B-204ENST00000619747 NKX1-1Q15270 411 aaPredicted RBP23.38■■□□□ 1.33
LAPTM4B-204ENST00000619747 PIGBQ92521 554 aa23.38■■□□□ 1.33
LAPTM4B-204ENST00000619747 PTPN12Q05209 780 aaKnown RBP23.38■■□□□ 1.33
LAPTM4B-204ENST00000619747 TFCP2Q12800 502 aa23.37■■□□□ 1.33
LAPTM4B-204ENST00000619747 TMX3Q96JJ7 454 aa23.37■■□□□ 1.33
LAPTM4B-204ENST00000619747 ABCC6O95255 1503 aa23.37■■□□□ 1.33
LAPTM4B-204ENST00000619747 ADAMTS2O95450 1211 aa23.37■■□□□ 1.33
LAPTM4B-204ENST00000619747 DNAJC10Q8IXB1 793 aa23.36■■□□□ 1.33
LAPTM4B-204ENST00000619747 RASEFQ8IZ41 740 aa23.36■■□□□ 1.33
LAPTM4B-204ENST00000619747 CHAMP1Q96JM3 812 aa23.36■■□□□ 1.33
LAPTM4B-204ENST00000619747 FAM227BQ96M60 508 aa23.36■■□□□ 1.33
LAPTM4B-204ENST00000619747 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
LAPTM4B-204ENST00000619747 CPA1P15085 419 aa23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 PTH1RQ03431 593 aa23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 BBXQ8WY36 941 aaPredicted RBP23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 DTNBO60941 627 aa23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 GBP4Q96PP9 640 aa23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 RFX5P48382 616 aaPredicted RBP23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 LSG1Q9H089 658 aaKnown RBP23.35■■□□□ 1.33
LAPTM4B-204ENST00000619747 USP42Q9H9J4 1324 aaKnown RBP23.34■■□□□ 1.33
LAPTM4B-204ENST00000619747 HSPA4P34932 840 aa23.34■■□□□ 1.33
LAPTM4B-204ENST00000619747 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.33
LAPTM4B-204ENST00000619747 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
LAPTM4B-204ENST00000619747 DDX11L8A8MPP1 907 aa23.33■■□□□ 1.32
LAPTM4B-204ENST00000619747 CASP7P55210 303 aa23.33■■□□□ 1.32
LAPTM4B-204ENST00000619747 RAD50Q92878 1312 aa23.33■■□□□ 1.32
LAPTM4B-204ENST00000619747 CHGBP05060 677 aa23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 SMAP1Q8IYB5 467 aaPredicted RBP23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 EVI5LQ96CN4 794 aa23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 FSD1Q9BTV5 496 aa23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 COPRSQ9NQ92 184 aa23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 DBNLQ9UJU6 430 aaKnown RBP23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 PARP4Q9UKK3 1724 aaKnown RBP23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 SNX14Q9Y5W7 946 aa23.32■■□□□ 1.32
LAPTM4B-204ENST00000619747 ANAPC15P60006 121 aa23.31■■□□□ 1.32
LAPTM4B-204ENST00000619747 ATG3Q9NT62 314 aa23.31■■□□□ 1.32
LAPTM4B-204ENST00000619747 PDIA4P13667 645 aaKnown RBP23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 FOXO4P98177 505 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 NMIQ13287 307 aaPredicted RBP23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 RABL6Q3YEC7 729 aaPredicted RBP23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 PRPF40BQ6NWY9 871 aaKnown RBP23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 DBNDD2Q9BQY9 259 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 GAS2L3Q86XJ1 694 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
LAPTM4B-204ENST00000619747 H7C1W4 665 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 OFD1O75665 1012 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 AFDNP55196 1824 aaKnown RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 GLI3P10071 1580 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 NUTM2BA6NNL0 878 aaPredicted RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 NUTM2EB1AL46 878 aaPredicted RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 BAG4O95429 457 aaKnown RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 NUTM2AQ8IVF1 878 aaPredicted RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 ABCA3Q99758 1704 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 KCNJ4P48050 445 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 FOXD4L6Q3SYB3 417 aaPredicted RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 MCTP1Q6DN14 999 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 FOXD4L3Q6VB84 417 aaPredicted RBP23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 RUFY2Q8WXA3 655 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
LAPTM4B-204ENST00000619747 PLEKHG2Q9H7P9 1386 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 TIMM10P62072 90 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 SYNE4Q8N205 404 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 A0A0D9SFI3 127 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 GPTP24298 496 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 FAM89AQ96GI7 184 aa23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 R3HCC1Q9Y3T6 440 aaKnown RBP23.28■■□□□ 1.32
LAPTM4B-204ENST00000619747 ARFGEF2Q9Y6D5 1785 aa23.27■■□□□ 1.32
LAPTM4B-204ENST00000619747 EXOC5O00471 708 aa23.27■■□□□ 1.32
LAPTM4B-204ENST00000619747 ADCK5Q3MIX3 580 aa23.27■■□□□ 1.32
LAPTM4B-204ENST00000619747 LRRC24Q50LG9 513 aa23.27■■□□□ 1.32
LAPTM4B-204ENST00000619747 ZDHHC9Q9Y397 364 aa23.27■■□□□ 1.32
LAPTM4B-204ENST00000619747 CASTP20810 708 aaKnown RBP23.26■■□□□ 1.31
LAPTM4B-204ENST00000619747 NUCB2P80303 420 aa23.26■■□□□ 1.31
LAPTM4B-204ENST00000619747 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 SLC4A9Q96Q91 983 aa23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 COL9A3Q14050 684 aaPredicted RBP23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 CCDC191Q8NCU4 936 aa23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
LAPTM4B-204ENST00000619747 DDX46Q7L014 1031 aaKnown RBP23.24■■□□□ 1.31
LAPTM4B-204ENST00000619747 SLFNL1Q499Z3 407 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms