RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
LINC00221-202ENST00000619530 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 ALDH1B1P30837 517 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 TAOK3Q9H2K8 898 aa20.25■□□□□ 0.83
LINC00221-202ENST00000619530 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
LINC00221-202ENST00000619530 TNRC6CQ9HCJ0 1690 aaKnown RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 RBM17Q96I25 401 aaKnown RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
LINC00221-202ENST00000619530 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
LINC00221-202ENST00000619530 FER1L6Q2WGJ9 1857 aa20.22■□□□□ 0.83
LINC00221-202ENST00000619530 HCLS1P14317 486 aaPredicted RBP20.22■□□□□ 0.83
LINC00221-202ENST00000619530 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
LINC00221-202ENST00000619530 RIC3Q7Z5B4 369 aa20.21■□□□□ 0.83
LINC00221-202ENST00000619530 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
LINC00221-202ENST00000619530 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
LINC00221-202ENST00000619530 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.82
LINC00221-202ENST00000619530 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
LINC00221-202ENST00000619530 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
LINC00221-202ENST00000619530 RTKN2Q8IZC4 609 aa20.19■□□□□ 0.82
LINC00221-202ENST00000619530 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
LINC00221-202ENST00000619530 LTBP3Q9NS15 1303 aa20.19■□□□□ 0.82
LINC00221-202ENST00000619530 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
LINC00221-202ENST00000619530 GLTPD2A6NH11 291 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
LINC00221-202ENST00000619530 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 ZC3H4Q9UPT8 1303 aaKnown RBP20.18■□□□□ 0.82
LINC00221-202ENST00000619530 TOMM70O94826 608 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
LINC00221-202ENST00000619530 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 CHMP4AQ9BY43 222 aa20.18■□□□□ 0.82
LINC00221-202ENST00000619530 IL16Q14005 1332 aa20.17■□□□□ 0.82
LINC00221-202ENST00000619530 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
LINC00221-202ENST00000619530 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
LINC00221-202ENST00000619530 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
LINC00221-202ENST00000619530 PPEF1O14829 653 aaPredicted RBP20.16■□□□□ 0.82
LINC00221-202ENST00000619530 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
LINC00221-202ENST00000619530 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
LINC00221-202ENST00000619530 MYD88Q99836 296 aa20.16■□□□□ 0.82
LINC00221-202ENST00000619530 RIC1Q4ADV7 1423 aa20.16■□□□□ 0.82
LINC00221-202ENST00000619530 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
LINC00221-202ENST00000619530 TIAM2Q8IVF5 1701 aa20.15■□□□□ 0.82
LINC00221-202ENST00000619530 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
LINC00221-202ENST00000619530 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
LINC00221-202ENST00000619530 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
LINC00221-202ENST00000619530 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
LINC00221-202ENST00000619530 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
LINC00221-202ENST00000619530 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
LINC00221-202ENST00000619530 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
LINC00221-202ENST00000619530 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
LINC00221-202ENST00000619530 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
LINC00221-202ENST00000619530 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
LINC00221-202ENST00000619530 HSPA6P17066 643 aa20.12■□□□□ 0.81
LINC00221-202ENST00000619530 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
LINC00221-202ENST00000619530 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
LINC00221-202ENST00000619530 MAP3K2Q9Y2U5 619 aa20.12■□□□□ 0.81
LINC00221-202ENST00000619530 ABCC4O15439 1325 aa20.12■□□□□ 0.81
LINC00221-202ENST00000619530 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
LINC00221-202ENST00000619530 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
LINC00221-202ENST00000619530 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
LINC00221-202ENST00000619530 G2E3Q7L622 706 aa20.11■□□□□ 0.81
LINC00221-202ENST00000619530 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
LINC00221-202ENST00000619530 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
LINC00221-202ENST00000619530 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
LINC00221-202ENST00000619530 LAMB2P55268 1798 aa20.1■□□□□ 0.81
LINC00221-202ENST00000619530 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
LINC00221-202ENST00000619530 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
LINC00221-202ENST00000619530 BBOX1O75936 387 aa20.1■□□□□ 0.81
LINC00221-202ENST00000619530 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
LINC00221-202ENST00000619530 PSMD1Q99460 953 aa20.1■□□□□ 0.81
LINC00221-202ENST00000619530 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
LINC00221-202ENST00000619530 KSR2Q6VAB6 950 aa20.09■□□□□ 0.81
LINC00221-202ENST00000619530 POTECB2RU33 542 aa20.08■□□□□ 0.81
LINC00221-202ENST00000619530 VAMP4O75379 141 aa20.08■□□□□ 0.81
LINC00221-202ENST00000619530 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
LINC00221-202ENST00000619530 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
LINC00221-202ENST00000619530 CCDC191Q8NCU4 936 aa20.08■□□□□ 0.81
LINC00221-202ENST00000619530 JDP2Q8WYK2 163 aa20.08■□□□□ 0.81
LINC00221-202ENST00000619530 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.81
LINC00221-202ENST00000619530 TAF1P21675 1872 aa20.08■□□□□ 0.8
LINC00221-202ENST00000619530 GRAPQ13588 217 aa20.07■□□□□ 0.8
LINC00221-202ENST00000619530 SP8Q8IXZ3 490 aa20.07■□□□□ 0.8
LINC00221-202ENST00000619530 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms