RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 NLGN1Q8N2Q7 840 aa7.46□□□□□ -1.21
CBWD3-215ENST00000619322 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.21
CBWD3-215ENST00000619322 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.21
CBWD3-215ENST00000619322 APLP1P51693 650 aa7.46□□□□□ -1.22
CBWD3-215ENST00000619322 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.22
CBWD3-215ENST00000619322 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
CBWD3-215ENST00000619322 ZNF236Q9UL36 1845 aa7.46□□□□□ -1.22
CBWD3-215ENST00000619322 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
CBWD3-215ENST00000619322 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
CBWD3-215ENST00000619322 C1QTNF8P60827 252 aa7.45□□□□□ -1.22
CBWD3-215ENST00000619322 R3HDM1Q15032 1099 aaKnown RBP7.45□□□□□ -1.22
CBWD3-215ENST00000619322 CC2D2BQ6DHV5 1058 aa7.45□□□□□ -1.22
CBWD3-215ENST00000619322 PADI6Q6TGC4 694 aa7.45□□□□□ -1.22
CBWD3-215ENST00000619322 TMC4Q7Z404 712 aa7.45□□□□□ -1.22
CBWD3-215ENST00000619322 NBPF6Q5VWK0 638 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 NBPF4Q96M43 638 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 PGAP2Q9UHJ9 254 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 CARMIL3Q8ND23 1372 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 TYW1BQ6NUM6 668 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 ZNF687Q8N1G0 1237 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 KCNA3P22001 575 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
CBWD3-215ENST00000619322 PLEKHO1Q53GL0 409 aaPredicted RBP7.43□□□□□ -1.22
CBWD3-215ENST00000619322 RTFDC1Q9BY42 306 aaPredicted RBP7.43□□□□□ -1.22
CBWD3-215ENST00000619322 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
CBWD3-215ENST00000619322 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
CBWD3-215ENST00000619322 PASKQ96RG2 1323 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 ERVV-1B6SEH8 477 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 XPCQ01831 940 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-215ENST00000619322 COL23A1Q86Y22 540 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-215ENST00000619322 ZNF784Q8NCA9 323 aaPredicted RBP7.42□□□□□ -1.22
CBWD3-215ENST00000619322 PNISRQ8TF01 805 aaKnown RBP7.42□□□□□ -1.22
CBWD3-215ENST00000619322 RGS19P49795 217 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 IFFO2Q5TF58 517 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 OTOFQ9HC10 1997 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 EIF4A2Q14240 407 aaKnown RBP7.42□□□□□ -1.22
CBWD3-215ENST00000619322 CHRNA2Q15822 529 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 NARFQ9UHQ1 456 aa7.42□□□□□ -1.22
CBWD3-215ENST00000619322 IL6STP40189 918 aaPredicted RBP7.41□□□□□ -1.22
CBWD3-215ENST00000619322 NGEFQ8N5V2 710 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 AK7Q96M32 723 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 A0A0G2JMZ2 1700 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 FRMPD3Q5JV73 1810 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 CCDC87Q9NVE4 849 aa7.41□□□□□ -1.22
CBWD3-215ENST00000619322 ST20-MTHFSA0A0A6YYL1 179 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 HSPA6P17066 643 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 HOXA10P31260 410 aaPredicted RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 CRY2Q49AN0 593 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 REPIN1Q9BWE0 567 aaKnown RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 SLC52A2Q9HAB3 445 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 COL2A1P02458 1487 aaPredicted RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 ZC3H6P61129 1189 aaKnown RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 INTS5Q6P9B9 1019 aaKnown RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 PSMD1Q99460 953 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 EYA1Q99502 592 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 FHDC1Q9C0D6 1143 aaPredicted RBP7.4□□□□□ -1.22
CBWD3-215ENST00000619322 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
CBWD3-215ENST00000619322 LOC102724428A0A0B4J2F2 783 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.23
CBWD3-215ENST00000619322 SIK1P57059 783 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 SLC10A5Q5PT55 438 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 DNAJC5GQ8N7S2 189 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 RAPGEF4Q8WZA2 1011 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 SLC12A5Q9H2X9 1139 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 CCNL1Q9UK58 526 aaPredicted RBP7.4□□□□□ -1.23
CBWD3-215ENST00000619322 DOCK2Q92608 1830 aa7.4□□□□□ -1.23
CBWD3-215ENST00000619322 MYH13Q9UKX3 1938 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 PIGBQ92521 554 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 PTPREP23469 700 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 EIF5P55010 431 aaKnown RBP7.39□□□□□ -1.23
CBWD3-215ENST00000619322 HIRIP3Q9BW71 556 aaPredicted RBP7.39□□□□□ -1.23
CBWD3-215ENST00000619322 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 YY1P25490 414 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 GAS2L2Q8NHY3 880 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 C7orf43Q8WVR3 580 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 SAGE1Q9NXZ1 904 aa7.39□□□□□ -1.23
CBWD3-215ENST00000619322 CASP8AP2Q9UKL3 1982 aa7.38□□□□□ -1.23
CBWD3-215ENST00000619322 GYS1P13807 737 aa7.38□□□□□ -1.23
CBWD3-215ENST00000619322 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
CBWD3-215ENST00000619322 CYP19A1P11511 503 aaPredicted RBP7.38□□□□□ -1.23
CBWD3-215ENST00000619322 KIAA1468Q9P260 1216 aa7.38□□□□□ -1.23
CBWD3-215ENST00000619322 PHIPQ8WWQ0 1821 aa7.38□□□□□ -1.23
CBWD3-215ENST00000619322 ADGRD1Q6QNK2 874 aa7.37□□□□□ -1.23
CBWD3-215ENST00000619322 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
CBWD3-215ENST00000619322 ZMYND10O75800 440 aa7.37□□□□□ -1.23
CBWD3-215ENST00000619322 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
CBWD3-215ENST00000619322 PNNQ9H307 717 aaKnown RBP7.37□□□□□ -1.23
CBWD3-215ENST00000619322 PCDH10Q9P2E7 1040 aa7.37□□□□□ -1.23
CBWD3-215ENST00000619322 SPEF2Q9C093 1822 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 ITGAEP38570 1179 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 EIF4G2P78344 907 aaKnown RBP eCLIP7.36□□□□□ -1.23
CBWD3-215ENST00000619322 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
CBWD3-215ENST00000619322 PPP1R3GB7ZBB8 358 aa7.36□□□□□ -1.23
CBWD3-215ENST00000619322 RNMTO43148 476 aaKnown RBP7.36□□□□□ -1.23
CBWD3-215ENST00000619322 TOMM70O94826 608 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms