RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	TPM2	P07951	284 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SDE2	Q6IQ49	451 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ZSCAN30	Q86W11	494 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	NT5DC4	Q86YG4	428 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	OXER1	Q8TDS5	423 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	NGLY1	Q96IV0	654 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	TBC1D2	Q9BYX2	928 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ODF2L	Q9ULJ1	636 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	KNDC1	Q76NI1	1749 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	HOXA2	O43364	376 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	VIL1	P09327	827 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SKIL	P12757	684 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	FOXK1	P85037	733 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	BIRC2	Q13490	618 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	EP400NL	Q6ZTU2	488 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	RPUSD2	Q8IZ73	545 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	IL17RA	Q96F46	866 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	LNPK	Q9C0E8	428 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CASS4	Q9NQ75	786 aa		4.99	□□□□□ -1.61
UBE2D3-233	ENST00000618836	KIF1C	O43896	1103 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SWT1	Q5T5J6	900 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	KLHL10	Q6JEL2	608 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	DRC7	Q8IY82	874 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	C22orf23	Q9BZE7	217 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	EFCC1	Q9HA90	598 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	GNE	Q9Y223	722 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CRYBG1	Q9Y4K1	1723 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	NUP153	P49790	1475 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	NYAP1	Q6ZVC0	841 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CDC5L	Q99459	802 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	TMX4	Q9H1E5	349 aa	Predicted RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	PRR12	Q9ULL5	1215 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	IPO5	O00410	1097 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	TTLL12	Q14166	644 aa	Predicted RBP	4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	TNS4	Q8IZW8	715 aa		4.98	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ANKRD33B	A6NCL7	494 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ZSCAN20	P17040	1043 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CASQ1	P31415	396 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	PTGDR	Q13258	359 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	MAPRE1	Q15691	268 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	TSNAXIP1	Q2TAA8	658 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CCDC174	Q6PII3	467 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ANKRD13D	Q6ZTN6	518 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ACRBP	Q8NEB7	543 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	FRS2	Q8WU20	508 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SPC25	Q9HBM1	224 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	ACAD8	Q9UKU7	415 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	AFF2	P51816	1311 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	PNPLA6	Q8IY17	1366 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	LAMB4	A4D0S4	1761 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SBF2	Q86WG5	1849 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CD53	P19397	219 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	PSMD2	Q13200	908 aa		4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CALR3	Q96L12	384 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-233	ENST00000618836	HMMR	O75330	724 aa		4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CEBPA	P49715	358 aa	Predicted RBP	4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	CLK1	P49759	484 aa	Known RBP	4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	INHBE	P58166	350 aa		4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	IRX5	P78411	483 aa	Predicted RBP	4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	COL19A1	Q14993	1142 aa		4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	STAG1	Q8WVM7	1258 aa		4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.96	□□□□□ -1.61
UBE2D3-233	ENST00000618836	IPO7	O95373	1038 aa	Known RBP	4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	POU5F1B	Q06416	359 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NEUROD6	Q96NK8	337 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MTA2	O94776	668 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ZNF853	P0CG23	659 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KCNA2	P16389	499 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	IQCE	Q6IPM2	695 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	FILIP1	Q7Z7B0	1213 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SAMD3	Q8N6K7	520 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	VPS37A	Q8NEZ2	397 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	DONSON	Q9NYP3	566 aa		4.96	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CDC42BPA	Q5VT25	1732 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CLCN1	P35523	988 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TCEAL1	Q15170	157 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PDILT	Q8N807	584 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KHSRP	Q92945	711 aa	Known RBP eCLIP	4.95	□□□□□ -1.62	3e-7	■■□□□ 13.7
UBE2D3-233	ENST00000618836	SCAPER	Q9BY12	1400 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ABCD1	P33897	745 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SRPK2	P78362	688 aa	Known RBP	4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MAP2K5	Q13163	448 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	DCTN1	Q14203	1278 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KCTD2	Q14681	263 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	LRRC27	Q9C0I9	530 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PKD1L3	Q7Z443	1732 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	WNK3	Q9BYP7	1800 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	IL16	Q14005	1332 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	RAD50	Q92878	1312 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MPHOSPH10	O00566	681 aa	Known RBP	4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	VAMP4	O75379	141 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	LDHC	P07864	332 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CAPN2	P17655	700 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	DHX8	Q14562	1220 aa	Known RBP	4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	RASA3	Q14644	834 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms