RNA–Protein interactions for RNA: ENST00000618596.1

GPC5-204, Transcript of glypican 5, humanhuman

TSL 5 BASIC

Gene GPC5, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-204ENST00000618596 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
GPC5-204ENST00000618596 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
GPC5-204ENST00000618596 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
GPC5-204ENST00000618596 AK7Q96M32 723 aa12.09□□□□□ -0.47
GPC5-204ENST00000618596 C4AP0C0L4 1744 aa12.08□□□□□ -0.47
GPC5-204ENST00000618596 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
GPC5-204ENST00000618596 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 H7C1W4 665 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
GPC5-204ENST00000618596 TXNRD1Q16881 649 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 PROM2Q8N271 834 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 GCC1Q96CN9 775 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
GPC5-204ENST00000618596 DCTPP1Q9H773 170 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 HDAC5Q9UQL6 1122 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 EP400Q96L91 3159 aa12.08□□□□□ -0.48
GPC5-204ENST00000618596 PHF14O94880 888 aa12.07□□□□□ -0.48
GPC5-204ENST00000618596 POLA2Q14181 598 aa12.07□□□□□ -0.48
GPC5-204ENST00000618596 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
GPC5-204ENST00000618596 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
GPC5-204ENST00000618596 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
GPC5-204ENST00000618596 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
GPC5-204ENST00000618596 PLSCR1O15162 318 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 RGS3P49796 1198 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 NUCB1Q02818 461 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 MTX1Q13505 466 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
GPC5-204ENST00000618596 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
GPC5-204ENST00000618596 APBB1O00213 710 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
GPC5-204ENST00000618596 PDE4AP27815 886 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
GPC5-204ENST00000618596 FAM89AQ96GI7 184 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
GPC5-204ENST00000618596 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
GPC5-204ENST00000618596 FOXO4P98177 505 aa12.04□□□□□ -0.48
GPC5-204ENST00000618596 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
GPC5-204ENST00000618596 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
GPC5-204ENST00000618596 ZBTB38Q8NAP3 1195 aaPredicted RBP12.04□□□□□ -0.48
GPC5-204ENST00000618596 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
GPC5-204ENST00000618596 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
GPC5-204ENST00000618596 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
GPC5-204ENST00000618596 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 RGL2O15211 777 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 ZPR1O75312 459 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 PARP10Q53GL7 1025 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 TRAPPC3LQ5T215 181 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 CLEC4GQ6UXB4 293 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 TRMT112Q9UI30 125 aaKnown RBP12.03□□□□□ -0.48
GPC5-204ENST00000618596 CDHR2Q9BYE9 1310 aa12.03□□□□□ -0.48
GPC5-204ENST00000618596 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
GPC5-204ENST00000618596 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
GPC5-204ENST00000618596 SSFA2P28290 1259 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 RFC4P35249 363 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 TBC1D9BQ66K14 1250 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 LMBR1LQ6UX01 489 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
GPC5-204ENST00000618596 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.49
GPC5-204ENST00000618596 LAMB2P55268 1798 aa12.02□□□□□ -0.49
GPC5-204ENST00000618596 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
GPC5-204ENST00000618596 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
GPC5-204ENST00000618596 NTSR2O95665 410 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
GPC5-204ENST00000618596 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
GPC5-204ENST00000618596 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 BCL11AQ9H165 835 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 SH3TC1Q8TE82 1336 aa12.01□□□□□ -0.49
GPC5-204ENST00000618596 MYH3P11055 1940 aa12□□□□□ -0.49
GPC5-204ENST00000618596 OS9Q13438 667 aaPredicted RBP12□□□□□ -0.49
GPC5-204ENST00000618596 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
GPC5-204ENST00000618596 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
GPC5-204ENST00000618596 CAMKK2Q96RR4 588 aa12□□□□□ -0.49
GPC5-204ENST00000618596 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
GPC5-204ENST00000618596 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
GPC5-204ENST00000618596 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
GPC5-204ENST00000618596 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
GPC5-204ENST00000618596 CTSWP56202 376 aa11.99□□□□□ -0.49
GPC5-204ENST00000618596 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
GPC5-204ENST00000618596 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
GPC5-204ENST00000618596 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
GPC5-204ENST00000618596 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
GPC5-204ENST00000618596 OTUD7AQ8TE49 926 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms