RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.48
NEK3-208ENST00000618534 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.48
NEK3-208ENST00000618534 PRAMEF22A3QJZ6 481 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 MAP4K1Q92918 833 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 ARID3AQ99856 593 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 SPTLC3Q9NUV7 552 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 SLC27A2O14975 620 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 SASH1O94885 1247 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 LARP1BQ659C4 914 aaKnown RBP24.32■■□□□ 1.48
NEK3-208ENST00000618534 CDC37L1Q7L3B6 337 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 TTC6Q86TZ1 520 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 FERMT3Q86UX7 667 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 KLHL34Q8N239 644 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 EAF2Q96CJ1 260 aaPredicted RBP24.32■■□□□ 1.48
NEK3-208ENST00000618534 SUCLG2Q96I99 432 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 PRIMPOLQ96LW4 560 aa24.32■■□□□ 1.48
NEK3-208ENST00000618534 RNMTO43148 476 aaKnown RBP24.31■■□□□ 1.48
NEK3-208ENST00000618534 GIGYF1O75420 1035 aaPredicted RBP24.31■■□□□ 1.48
NEK3-208ENST00000618534 PLEKHO1Q53GL0 409 aaPredicted RBP24.31■■□□□ 1.48
NEK3-208ENST00000618534 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
NEK3-208ENST00000618534 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
NEK3-208ENST00000618534 TLR7Q9NYK1 1049 aaKnown RBP24.31■■□□□ 1.48
NEK3-208ENST00000618534 FAM173BQ6P4H8 233 aa24.3■■□□□ 1.48
NEK3-208ENST00000618534 TCEANC2Q96MN5 208 aa24.3■■□□□ 1.48
NEK3-208ENST00000618534 A0A0D9SFI3 127 aa24.3■■□□□ 1.48
NEK3-208ENST00000618534 CCDC192P0DO97 292 aa24.3■■□□□ 1.48
NEK3-208ENST00000618534 CHMP3Q9Y3E7 222 aa24.3■■□□□ 1.48
NEK3-208ENST00000618534 KRT85P78386 507 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 TSC1Q92574 1164 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 KCNF1Q9H3M0 494 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 BICC1Q9H694 974 aaKnown RBP24.29■■□□□ 1.48
NEK3-208ENST00000618534 GRM8O00222 908 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 HIP1O00291 1037 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 TAF6LQ9Y6J9 622 aa24.29■■□□□ 1.48
NEK3-208ENST00000618534 PSMA5P28066 241 aa24.28■■□□□ 1.48
NEK3-208ENST00000618534 G3BP1Q13283 466 aaKnown RBP eCLIP24.28■■□□□ 1.48
NEK3-208ENST00000618534 LIG1P18858 919 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 HMGN5P82970 282 aaKnown RBP24.27■■□□□ 1.48
NEK3-208ENST00000618534 C1orf141Q5JVX7 400 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 SNRKQ9NRH2 765 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
NEK3-208ENST00000618534 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 SPC24Q8NBT2 197 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 LINS1Q8NG48 757 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 FSD1Q9BTV5 496 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 BOLA2Q9H3K6 86 aa24.27■■□□□ 1.48
NEK3-208ENST00000618534 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 BLOC1S2Q6QNY1 142 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 SIL1Q9H173 461 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 PYCARDQ9ULZ3 195 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 NCAPD2Q15021 1401 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 NUP62CLQ9H1M0 184 aa24.26■■□□□ 1.47
NEK3-208ENST00000618534 ELP1O95163 1332 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 CAMK4Q16566 473 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 KIAA1524Q8TCG1 905 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 MED23Q9ULK4 1368 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 UTYO14607 1347 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 GTF2F1P35269 517 aaKnown RBP eCLIP24.25■■□□□ 1.47
NEK3-208ENST00000618534 AIMP1Q12904 312 aaKnown RBP24.25■■□□□ 1.47
NEK3-208ENST00000618534 MAP3K11Q16584 847 aa24.25■■□□□ 1.47
NEK3-208ENST00000618534 RBM33Q96EV2 1170 aaKnown RBP24.25■■□□□ 1.47
NEK3-208ENST00000618534 PDCP20941 246 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 RPS6KB1P23443 525 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 FAM200AQ8TCP9 573 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 MRVI1Q9Y6F6 885 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 TOB2Q14106 344 aaPredicted RBP24.24■■□□□ 1.47
NEK3-208ENST00000618534 RNF20Q5VTR2 975 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
NEK3-208ENST00000618534 TYRO3Q06418 890 aa24.23■■□□□ 1.47
NEK3-208ENST00000618534 ZNF589Q86UQ0 364 aaPredicted RBP24.23■■□□□ 1.47
NEK3-208ENST00000618534 ZNF710Q8N1W2 664 aa24.23■■□□□ 1.47
NEK3-208ENST00000618534 KLHDC4Q8TBB5 520 aa24.23■■□□□ 1.47
NEK3-208ENST00000618534 PHRF1Q9P1Y6 1649 aaKnown RBP24.23■■□□□ 1.47
NEK3-208ENST00000618534 ANKRD1Q15327 319 aa24.23■■□□□ 1.47
NEK3-208ENST00000618534 OVOS2A0A0G2JMS6 1433 aa24.22■■□□□ 1.47
NEK3-208ENST00000618534 PDIA4P13667 645 aaKnown RBP24.22■■□□□ 1.47
NEK3-208ENST00000618534 PSME1Q06323 249 aa24.22■■□□□ 1.47
NEK3-208ENST00000618534 LARP1Q6PKG0 1096 aaKnown RBP24.22■■□□□ 1.47
NEK3-208ENST00000618534 STK3Q13188 491 aa24.22■■□□□ 1.47
NEK3-208ENST00000618534 TPM3P06753 285 aa24.21■■□□□ 1.47
NEK3-208ENST00000618534 LUZP1Q86V48 1076 aa24.21■■□□□ 1.47
NEK3-208ENST00000618534 CKAP2LQ8IYA6 745 aa24.21■■□□□ 1.47
NEK3-208ENST00000618534 DACT1Q9NYF0 836 aa24.21■■□□□ 1.47
NEK3-208ENST00000618534 TFIP11Q9UBB9 837 aaKnown RBP24.21■■□□□ 1.47
NEK3-208ENST00000618534 FAM177BA6PVY3 158 aa24.21■■□□□ 1.47
NEK3-208ENST00000618534 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
NEK3-208ENST00000618534 GOLGA6L6A8MZA4 724 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 IGKV5-2P06315 115 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 EDC3Q96F86 508 aaKnown RBP24.2■■□□□ 1.46
NEK3-208ENST00000618534 SPATA32Q96LK8 384 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 DDX21Q9NR30 783 aaKnown RBP eCLIP24.2■■□□□ 1.46
NEK3-208ENST00000618534 JCADQ9P266 1359 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 FER1L4A9Z1Z3 1794 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 ALDH8A1Q9H2A2 487 aaPredicted RBP24.2■■□□□ 1.46
NEK3-208ENST00000618534 TNMDQ9H2S6 317 aa24.2■■□□□ 1.46
NEK3-208ENST00000618534 PDIA6Q15084 440 aa24.19■■□□□ 1.46
NEK3-208ENST00000618534 SCAND2PQ9GZW5 306 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms