RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 FAM182BQ5T319 152 aa13.83□□□□□ -0.2
CPEB1-216ENST00000618449 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
CPEB1-216ENST00000618449 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
CPEB1-216ENST00000618449 KLHDC4Q8TBB5 520 aa13.83□□□□□ -0.2
CPEB1-216ENST00000618449 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
CPEB1-216ENST00000618449 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
CPEB1-216ENST00000618449 ATRNO75882 1429 aa13.82□□□□□ -0.2
CPEB1-216ENST00000618449 CDC45O75419 566 aa13.82□□□□□ -0.2
CPEB1-216ENST00000618449 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
CPEB1-216ENST00000618449 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
CPEB1-216ENST00000618449 TRIM28Q13263 835 aaKnown RBP13.82□□□□□ -0.2
CPEB1-216ENST00000618449 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
CPEB1-216ENST00000618449 STAP2Q9UGK3 403 aa13.82□□□□□ -0.2
CPEB1-216ENST00000618449 FOXO4P98177 505 aa13.81□□□□□ -0.2
CPEB1-216ENST00000618449 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
CPEB1-216ENST00000618449 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
CPEB1-216ENST00000618449 RFX5P48382 616 aaPredicted RBP13.81□□□□□ -0.2
CPEB1-216ENST00000618449 EIF5P55010 431 aaKnown RBP13.81□□□□□ -0.2
CPEB1-216ENST00000618449 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPEB1-216ENST00000618449 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
CPEB1-216ENST00000618449 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
CPEB1-216ENST00000618449 ERC1Q8IUD2 1116 aa13.81□□□□□ -0.2
CPEB1-216ENST00000618449 SIL1Q9H173 461 aa13.81□□□□□ -0.2
CPEB1-216ENST00000618449 SASH1O94885 1247 aa13.8□□□□□ -0.2
CPEB1-216ENST00000618449 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
CPEB1-216ENST00000618449 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
CPEB1-216ENST00000618449 CLASRPQ8N2M8 674 aaKnown RBP13.8□□□□□ -0.2
CPEB1-216ENST00000618449 COPRSQ9NQ92 184 aa13.8□□□□□ -0.2
CPEB1-216ENST00000618449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.8□□□□□ -0.2
CPEB1-216ENST00000618449 GPTP24298 496 aa13.79□□□□□ -0.2
CPEB1-216ENST00000618449 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
CPEB1-216ENST00000618449 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
CPEB1-216ENST00000618449 QTRT2Q9H974 415 aaKnown RBP13.79□□□□□ -0.2
CPEB1-216ENST00000618449 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
CPEB1-216ENST00000618449 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
CPEB1-216ENST00000618449 HSP90AB3PQ58FF7 597 aa13.79□□□□□ -0.2
CPEB1-216ENST00000618449 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
CPEB1-216ENST00000618449 AOX1Q06278 1338 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 KCNQ4P56696 695 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 NLRP10Q86W26 655 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 FAM89AQ96GI7 184 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 CHMP3Q9Y3E7 222 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 RREB1Q92766 1687 aa13.78□□□□□ -0.2
CPEB1-216ENST00000618449 PCCAP05165 728 aaPredicted RBP13.78□□□□□ -0.2
CPEB1-216ENST00000618449 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
CPEB1-216ENST00000618449 LINC00116Q8NCU8 138 aa13.77□□□□□ -0.21
CPEB1-216ENST00000618449 PI4K2BQ8TCG2 481 aa13.77□□□□□ -0.21
CPEB1-216ENST00000618449 SNX21Q969T3 373 aa13.77□□□□□ -0.21
CPEB1-216ENST00000618449 NHSQ6T4R5 1651 aa13.77□□□□□ -0.21
CPEB1-216ENST00000618449 NUP98P52948 1817 aa13.77□□□□□ -0.21
CPEB1-216ENST00000618449 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
CPEB1-216ENST00000618449 ZNF831Q5JPB2 1677 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 BTAF1O14981 1849 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
CPEB1-216ENST00000618449 AACSQ86V21 672 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 EAF2Q96CJ1 260 aaPredicted RBP13.76□□□□□ -0.21
CPEB1-216ENST00000618449 ANKRD36CQ5JPF3 1778 aa13.76□□□□□ -0.21
CPEB1-216ENST00000618449 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
CPEB1-216ENST00000618449 IFIT2P09913 472 aaKnown RBP13.75□□□□□ -0.21
CPEB1-216ENST00000618449 GSE1Q14687 1217 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 RILPL2Q969X0 211 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 TTC41PQ6P2S7 1318 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 UBN2Q6ZU65 1347 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 KIF2CQ99661 725 aa13.75□□□□□ -0.21
CPEB1-216ENST00000618449 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 CASC1Q6TDU7 716 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 PLA2G12BQ9BX93 195 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
CPEB1-216ENST00000618449 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
CPEB1-216ENST00000618449 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
CPEB1-216ENST00000618449 TFCP2Q12800 502 aa13.73□□□□□ -0.21
CPEB1-216ENST00000618449 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
CPEB1-216ENST00000618449 CHMP5Q9NZZ3 219 aa13.73□□□□□ -0.21
CPEB1-216ENST00000618449 TRMT112Q9UI30 125 aaKnown RBP13.73□□□□□ -0.21
CPEB1-216ENST00000618449 ZNF594Q96JF6 807 aaPredicted RBP13.73□□□□□ -0.21
CPEB1-216ENST00000618449 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
CPEB1-216ENST00000618449 GLRX3O76003 335 aaKnown RBP13.72□□□□□ -0.21
CPEB1-216ENST00000618449 CSF1RP07333 972 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
CPEB1-216ENST00000618449 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 ERC2O15083 957 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 GPATCH3Q96I76 525 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 CCNL1Q9UK58 526 aaPredicted RBP13.72□□□□□ -0.21
CPEB1-216ENST00000618449 EP400Q96L91 3159 aa13.72□□□□□ -0.21
CPEB1-216ENST00000618449 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
CPEB1-216ENST00000618449 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 TNNI3KQ59H18 835 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 FPGT-TNNI3KV9GXZ4 949 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 CHMLP26374 656 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 LRRC24Q50LG9 513 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 SUSD4Q5VX71 490 aa13.71□□□□□ -0.21
CPEB1-216ENST00000618449 EYA2O00167 538 aa13.7□□□□□ -0.22
CPEB1-216ENST00000618449 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms