RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 DZIP1LQ8IYY4 767 aaKnown RBP28.73■■■□□ 2.19
CBWD3-213ENST00000618217 SRCIN1Q9C0H9 1055 aa28.73■■■□□ 2.19
CBWD3-213ENST00000618217 CWC25Q9NXE8 425 aaPredicted RBP28.73■■■□□ 2.19
CBWD3-213ENST00000618217 PARP3Q9Y6F1 533 aa28.73■■■□□ 2.19
CBWD3-213ENST00000618217 NTSR2O95665 410 aa28.72■■■□□ 2.19
CBWD3-213ENST00000618217 GCKRQ14397 625 aa28.72■■■□□ 2.19
CBWD3-213ENST00000618217 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.72■■■□□ 2.19
CBWD3-213ENST00000618217 CCT4P50991 539 aaKnown RBP28.72■■■□□ 2.19
CBWD3-213ENST00000618217 PPP1R42Q7Z4L9 355 aa28.71■■■□□ 2.19
CBWD3-213ENST00000618217 NBPF5PQ86XG9 351 aaPredicted RBP28.71■■■□□ 2.19
CBWD3-213ENST00000618217 FAM177BA6PVY3 158 aa28.7■■■□□ 2.19
CBWD3-213ENST00000618217 POLD1P28340 1107 aa28.7■■■□□ 2.19
CBWD3-213ENST00000618217 PANK1Q8TE04 598 aa28.7■■■□□ 2.19
CBWD3-213ENST00000618217 UTP14AQ9BVJ6 771 aaKnown RBP28.7■■■□□ 2.19
CBWD3-213ENST00000618217 SUPT16HQ9Y5B9 1047 aaKnown RBP28.7■■■□□ 2.19
CBWD3-213ENST00000618217 PDE3AQ14432 1141 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 C20orf194Q5TEA3 1177 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 PRR5LQ6MZQ0 368 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 TPTE2Q6XPS3 522 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 TMEM57Q8N5G2 664 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 NYXQ9GZU5 481 aa28.69■■■□□ 2.18
CBWD3-213ENST00000618217 MS4A1P11836 297 aa28.68■■■□□ 2.18
CBWD3-213ENST00000618217 FTSJ3Q8IY81 847 aaKnown RBP28.68■■■□□ 2.18
CBWD3-213ENST00000618217 SYNE4Q8N205 404 aa28.68■■■□□ 2.18
CBWD3-213ENST00000618217 ZBTB38Q8NAP3 1195 aaPredicted RBP28.68■■■□□ 2.18
CBWD3-213ENST00000618217 TRMT112Q9UI30 125 aaKnown RBP28.68■■■□□ 2.18
CBWD3-213ENST00000618217 H7C1W4 665 aa28.67■■■□□ 2.18
CBWD3-213ENST00000618217 CNBD1Q8NA66 436 aa28.67■■■□□ 2.18
CBWD3-213ENST00000618217 FAM89AQ96GI7 184 aa28.67■■■□□ 2.18
CBWD3-213ENST00000618217 PCCAP05165 728 aaPredicted RBP28.66■■■□□ 2.18
CBWD3-213ENST00000618217 NUTM1Q86Y26 1132 aa28.66■■■□□ 2.18
CBWD3-213ENST00000618217 USP44Q9H0E7 712 aa28.66■■■□□ 2.18
CBWD3-213ENST00000618217 CASP7P55210 303 aa28.65■■■□□ 2.18
CBWD3-213ENST00000618217 ERFEQ4G0M1 354 aa28.65■■■□□ 2.18
CBWD3-213ENST00000618217 ANKRD31Q8N7Z5 1873 aa28.65■■■□□ 2.18
CBWD3-213ENST00000618217 UTYO14607 1347 aa28.65■■■□□ 2.18
CBWD3-213ENST00000618217 SH3TC1Q8TE82 1336 aa28.65■■■□□ 2.18
CBWD3-213ENST00000618217 KIF13BQ9NQT8 1826 aa28.64■■■□□ 2.18
CBWD3-213ENST00000618217 GRM8O00222 908 aa28.64■■■□□ 2.18
CBWD3-213ENST00000618217 SLC10A5Q5PT55 438 aa28.64■■■□□ 2.18
CBWD3-213ENST00000618217 JARID2Q92833 1246 aaPredicted RBP28.64■■■□□ 2.18
CBWD3-213ENST00000618217 ABCC12Q96J65 1359 aa28.64■■■□□ 2.17
CBWD3-213ENST00000618217 DDX60Q8IY21 1712 aaKnown RBP28.63■■■□□ 2.17
CBWD3-213ENST00000618217 CCDC24Q8N4L8 307 aa28.63■■■□□ 2.17
CBWD3-213ENST00000618217 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
CBWD3-213ENST00000618217 UBE3BQ7Z3V4 1068 aa28.62■■■□□ 2.17
CBWD3-213ENST00000618217 C10orf71Q711Q0 1435 aa28.62■■■□□ 2.17
CBWD3-213ENST00000618217 NBPF7P0C2Y1 421 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-213ENST00000618217 C9orf78Q9NZ63 289 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-213ENST00000618217 LAMB2P55268 1798 aa28.61■■■□□ 2.17
CBWD3-213ENST00000618217 LRP5O75197 1615 aa28.61■■■□□ 2.17
CBWD3-213ENST00000618217 CDHR2Q9BYE9 1310 aa28.61■■■□□ 2.17
CBWD3-213ENST00000618217 GTF2E1P29083 439 aaPredicted RBP28.61■■■□□ 2.17
CBWD3-213ENST00000618217 RIC1Q4ADV7 1423 aa28.6■■■□□ 2.17
CBWD3-213ENST00000618217 ST5P78524 1137 aa28.59■■■□□ 2.17
CBWD3-213ENST00000618217 MVPQ14764 893 aaKnown RBP28.59■■■□□ 2.17
CBWD3-213ENST00000618217 ITPRIPQ8IWB1 547 aa28.59■■■□□ 2.17
CBWD3-213ENST00000618217 BRIP1Q9BX63 1249 aa28.59■■■□□ 2.17
CBWD3-213ENST00000618217 COG6Q9Y2V7 657 aa28.59■■■□□ 2.17
CBWD3-213ENST00000618217 TNRC6CQ9HCJ0 1690 aaKnown RBP28.59■■■□□ 2.17
CBWD3-213ENST00000618217 IRS4O14654 1257 aaPredicted RBP28.58■■■□□ 2.17
CBWD3-213ENST00000618217 NPHP1O15259 732 aa28.58■■■□□ 2.17
CBWD3-213ENST00000618217 HCLS1P14317 486 aaPredicted RBP28.58■■■□□ 2.17
CBWD3-213ENST00000618217 MEIS3Q99687 375 aa28.58■■■□□ 2.17
CBWD3-213ENST00000618217 ZBTB7BO15156 539 aaPredicted RBP28.58■■■□□ 2.17
CBWD3-213ENST00000618217 SRCAPQ6ZRS2 3230 aa28.57■■■□□ 2.16
CBWD3-213ENST00000618217 KLRG2A4D1S0 409 aaPredicted RBP28.56■■■□□ 2.16
CBWD3-213ENST00000618217 C3orf67Q6ZVT6 689 aa28.56■■■□□ 2.16
CBWD3-213ENST00000618217 KAZALD1Q96I82 304 aa28.56■■■□□ 2.16
CBWD3-213ENST00000618217 MYH3P11055 1940 aa28.56■■■□□ 2.16
CBWD3-213ENST00000618217 PLA2G12BQ9BX93 195 aa28.55■■■□□ 2.16
CBWD3-213ENST00000618217 KIAA1551Q9HCM1 1747 aa28.54■■■□□ 2.16
CBWD3-213ENST00000618217 CD2APQ9Y5K6 639 aa28.54■■■□□ 2.16
CBWD3-213ENST00000618217 PDE8AO60658 829 aa28.53■■■□□ 2.16
CBWD3-213ENST00000618217 GNAI3P08754 354 aa28.53■■■□□ 2.16
CBWD3-213ENST00000618217 DDX19BQ9UMR2 479 aa28.53■■■□□ 2.16
CBWD3-213ENST00000618217 UBTFL1P0CB47 393 aaPredicted RBP28.52■■■□□ 2.16
CBWD3-213ENST00000618217 HSP90B1P14625 803 aaKnown RBP28.52■■■□□ 2.16
CBWD3-213ENST00000618217 FOXO4P98177 505 aa28.52■■■□□ 2.16
CBWD3-213ENST00000618217 SUCLG2Q96I99 432 aa28.52■■■□□ 2.16
CBWD3-213ENST00000618217 PDE6BP35913 854 aa28.51■■■□□ 2.15
CBWD3-213ENST00000618217 CRY2Q49AN0 593 aa28.51■■■□□ 2.15
CBWD3-213ENST00000618217 EPHA10Q5JZY3 1008 aa28.51■■■□□ 2.15
CBWD3-213ENST00000618217 NLRP3Q96P20 1036 aa28.51■■■□□ 2.15
CBWD3-213ENST00000618217 COL11A2P13942 1736 aaPredicted RBP28.51■■■□□ 2.15
CBWD3-213ENST00000618217 SF3B3Q15393 1217 aaKnown RBP28.5■■■□□ 2.15
CBWD3-213ENST00000618217 FHDC1Q9C0D6 1143 aaPredicted RBP28.5■■■□□ 2.15
CBWD3-213ENST00000618217 ZBTB40Q9NUA8 1239 aa28.49■■■□□ 2.15
CBWD3-213ENST00000618217 PPP1R1BQ9UD71 204 aaPredicted RBP28.49■■■□□ 2.15
CBWD3-213ENST00000618217 CSF1RP07333 972 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 CTSWP56202 376 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 TGFB2P61812 414 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 TTLL11Q8NHH1 800 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 CRBNQ96SW2 442 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 DLEC1Q9Y238 1755 aa28.48■■■□□ 2.15
CBWD3-213ENST00000618217 SRGNP10124 158 aa28.47■■■□□ 2.15
CBWD3-213ENST00000618217 LRRFIP2Q9Y608 721 aaKnown RBP28.47■■■□□ 2.15
CBWD3-213ENST00000618217 RABL6Q3YEC7 729 aaPredicted RBP28.47■■■□□ 2.15
CBWD3-213ENST00000618217 ANKRD44Q8N8A2 993 aa28.47■■■□□ 2.15
CBWD3-213ENST00000618217 BICC1Q9H694 974 aaKnown RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms