RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 SIL1Q9H173 461 aa25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 ATRNO75882 1429 aa25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 IL6STP40189 918 aaPredicted RBP25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 CRKLP46109 303 aaKnown RBP25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 GIGYF2Q6Y7W6 1299 aaKnown RBP25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 UPF2Q9HAU5 1272 aaKnown RBP25.37■■□□□ 1.65
CNTNAP3B-212ENST00000617422 TBC1D2BQ9UPU7 963 aa25.36■■□□□ 1.65
CNTNAP3B-212ENST00000617422 NUP98P52948 1817 aa25.36■■□□□ 1.65
CNTNAP3B-212ENST00000617422 LMBR1LQ6UX01 489 aa25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 CCDC87Q9NVE4 849 aa25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 EP400Q96L91 3159 aa25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 EIF5P55010 431 aaKnown RBP25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 PTPN12Q05209 780 aaKnown RBP25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 TRIM28Q13263 835 aaKnown RBP25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 C22orf23Q9BZE7 217 aa25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 COL5A3P25940 1745 aaPredicted RBP25.35■■□□□ 1.65
CNTNAP3B-212ENST00000617422 KCNQ4P56696 695 aa25.34■■□□□ 1.65
CNTNAP3B-212ENST00000617422 ANKRD36CQ5JPF3 1778 aa25.34■■□□□ 1.65
CNTNAP3B-212ENST00000617422 BTAF1O14981 1849 aa25.33■■□□□ 1.65
CNTNAP3B-212ENST00000617422 GPTP24298 496 aa25.33■■□□□ 1.65
CNTNAP3B-212ENST00000617422 PI4K2BQ8TCG2 481 aa25.33■■□□□ 1.65
CNTNAP3B-212ENST00000617422 SMARCC1Q92922 1105 aaPredicted RBP25.33■■□□□ 1.65
CNTNAP3B-212ENST00000617422 COPRSQ9NQ92 184 aa25.33■■□□□ 1.65
CNTNAP3B-212ENST00000617422 SLC4A3P48751 1232 aa25.32■■□□□ 1.64
CNTNAP3B-212ENST00000617422 DZIP3Q86Y13 1208 aaKnown RBP25.32■■□□□ 1.64
CNTNAP3B-212ENST00000617422 ONECUT3O60422 494 aaPredicted RBP25.32■■□□□ 1.64
CNTNAP3B-212ENST00000617422 SYNE4Q8N205 404 aa25.32■■□□□ 1.64
CNTNAP3B-212ENST00000617422 G3BP1Q13283 466 aaKnown RBP eCLIP25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 FAM89AQ96GI7 184 aa25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 NHSQ6T4R5 1651 aa25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 TRPC5Q9UL62 973 aaPredicted RBP25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
CNTNAP3B-212ENST00000617422 AOX1Q06278 1338 aa25.3■■□□□ 1.64
CNTNAP3B-212ENST00000617422 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
CNTNAP3B-212ENST00000617422 EAF2Q96CJ1 260 aaPredicted RBP25.3■■□□□ 1.64
CNTNAP3B-212ENST00000617422 CLASRPQ8N2M8 674 aaKnown RBP25.29■■□□□ 1.64
CNTNAP3B-212ENST00000617422 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
CNTNAP3B-212ENST00000617422 USP42Q9H9J4 1324 aaKnown RBP25.29■■□□□ 1.64
CNTNAP3B-212ENST00000617422 SBF2Q86WG5 1849 aa25.29■■□□□ 1.64
CNTNAP3B-212ENST00000617422 ERVV-1B6SEH8 477 aa25.28■■□□□ 1.64
CNTNAP3B-212ENST00000617422 SEPT12Q8IYM1 358 aa25.28■■□□□ 1.64
CNTNAP3B-212ENST00000617422 PCCAP05165 728 aaPredicted RBP25.28■■□□□ 1.64
CNTNAP3B-212ENST00000617422 CHMP3Q9Y3E7 222 aa25.28■■□□□ 1.64
CNTNAP3B-212ENST00000617422 UBN2Q6ZU65 1347 aa25.28■■□□□ 1.64
CNTNAP3B-212ENST00000617422 AACSQ86V21 672 aa25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 TLR7Q9NYK1 1049 aaKnown RBP25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 MAP4K4O95819 1239 aaPredicted RBP25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 RBM25P49756 843 aaKnown RBP25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 ZBTB38Q8NAP3 1195 aaPredicted RBP25.27■■□□□ 1.64
CNTNAP3B-212ENST00000617422 CCDC8Q9H0W5 538 aaPredicted RBP25.25■■□□□ 1.63
CNTNAP3B-212ENST00000617422 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
CNTNAP3B-212ENST00000617422 ZNF34Q8IZ26 560 aa25.25■■□□□ 1.63
CNTNAP3B-212ENST00000617422 RILPL2Q969X0 211 aa25.25■■□□□ 1.63
CNTNAP3B-212ENST00000617422 CAMTA2O94983 1202 aa25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 HSP90AB3PQ58FF7 597 aa25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 ZNF594Q96JF6 807 aaPredicted RBP25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 IFIT2P09913 472 aaKnown RBP25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 TFCP2Q12800 502 aa25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 NFKBIBQ15653 356 aa25.24■■□□□ 1.63
CNTNAP3B-212ENST00000617422 AK9Q5TCS8 1911 aa25.23■■□□□ 1.63
CNTNAP3B-212ENST00000617422 SMIM5Q71RC9 77 aa25.23■■□□□ 1.63
CNTNAP3B-212ENST00000617422 ATG9AQ7Z3C6 839 aa25.23■■□□□ 1.63
CNTNAP3B-212ENST00000617422 KIF2CQ99661 725 aa25.23■■□□□ 1.63
CNTNAP3B-212ENST00000617422 TTC41PQ6P2S7 1318 aa25.23■■□□□ 1.63
CNTNAP3B-212ENST00000617422 PLA2G12BQ9BX93 195 aa25.22■■□□□ 1.63
CNTNAP3B-212ENST00000617422 CCDC85AQ96PX6 553 aaPredicted RBP25.22■■□□□ 1.63
CNTNAP3B-212ENST00000617422 ECHDC1Q9NTX5 307 aa25.22■■□□□ 1.63
CNTNAP3B-212ENST00000617422 CDHR2Q9BYE9 1310 aa25.21■■□□□ 1.63
CNTNAP3B-212ENST00000617422 CHMLP26374 656 aa25.21■■□□□ 1.63
CNTNAP3B-212ENST00000617422 CSF1RP07333 972 aa25.2■■□□□ 1.62
CNTNAP3B-212ENST00000617422 LRRC24Q50LG9 513 aa25.2■■□□□ 1.62
CNTNAP3B-212ENST00000617422 TRMT112Q9UI30 125 aaKnown RBP25.2■■□□□ 1.62
CNTNAP3B-212ENST00000617422 BRWD3Q6RI45 1802 aa25.19■■□□□ 1.62
CNTNAP3B-212ENST00000617422 USP26Q9BXU7 913 aa25.19■■□□□ 1.62
CNTNAP3B-212ENST00000617422 PUS3Q9BZE2 481 aaKnown RBP25.19■■□□□ 1.62
CNTNAP3B-212ENST00000617422 IL25Q9H293 177 aa25.19■■□□□ 1.62
CNTNAP3B-212ENST00000617422 LY75O60449 1722 aa25.19■■□□□ 1.62
CNTNAP3B-212ENST00000617422 BCORQ6W2J9 1755 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 GLRX3O76003 335 aaKnown RBP25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 TNNI3KQ59H18 835 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 FPGT-TNNI3KV9GXZ4 949 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 MYH3P11055 1940 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 SUSD4Q5VX71 490 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 CASC1Q6TDU7 716 aa25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 DBNLQ9UJU6 430 aaKnown RBP25.18■■□□□ 1.62
CNTNAP3B-212ENST00000617422 CNTNAP4Q9C0A0 1308 aa25.17■■□□□ 1.62
CNTNAP3B-212ENST00000617422 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
CNTNAP3B-212ENST00000617422 GSE1Q14687 1217 aa25.17■■□□□ 1.62
CNTNAP3B-212ENST00000617422 TTLL11Q8NHH1 800 aa25.17■■□□□ 1.62
CNTNAP3B-212ENST00000617422 ESYT1Q9BSJ8 1104 aa25.17■■□□□ 1.62
CNTNAP3B-212ENST00000617422 ERC2O15083 957 aa25.16■■□□□ 1.62
CNTNAP3B-212ENST00000617422 AMIGO3Q86WK7 504 aa25.16■■□□□ 1.62
CNTNAP3B-212ENST00000617422 TBC1D2Q9BYX2 928 aa25.16■■□□□ 1.62
CNTNAP3B-212ENST00000617422 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
CNTNAP3B-212ENST00000617422 EYA2O00167 538 aa25.15■■□□□ 1.62
CNTNAP3B-212ENST00000617422 GREM2Q9H772 168 aa25.15■■□□□ 1.62
CNTNAP3B-212ENST00000617422 CCNL1Q9UK58 526 aaPredicted RBP25.15■■□□□ 1.62
CNTNAP3B-212ENST00000617422 FAM177BA6PVY3 158 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms