RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 HDAC1Q13547 482 aaPredicted RBP19.04■□□□□ 0.64
CBWD1-225ENST00000616944 CEP85Q6P2H3 762 aa19.04■□□□□ 0.64
CBWD1-225ENST00000616944 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
CBWD1-225ENST00000616944 UBN2Q6ZU65 1347 aa19.04■□□□□ 0.64
CBWD1-225ENST00000616944 USP42Q9H9J4 1324 aaKnown RBP19.04■□□□□ 0.64
CBWD1-225ENST00000616944 DDX60Q8IY21 1712 aaKnown RBP19.04■□□□□ 0.64
CBWD1-225ENST00000616944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.03■□□□□ 0.64
CBWD1-225ENST00000616944 TRAPPC3LQ5T215 181 aa19.03■□□□□ 0.64
CBWD1-225ENST00000616944 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
CBWD1-225ENST00000616944 ANKRD44Q8N8A2 993 aa19.03■□□□□ 0.64
CBWD1-225ENST00000616944 H7C1W4 665 aa19.03■□□□□ 0.64
CBWD1-225ENST00000616944 RPAP2Q8IXW5 612 aaPredicted RBP19.03■□□□□ 0.64
CBWD1-225ENST00000616944 KAZALD1Q96I82 304 aa19.03■□□□□ 0.64
CBWD1-225ENST00000616944 SRP68Q9UHB9 627 aaKnown RBP19.02■□□□□ 0.64
CBWD1-225ENST00000616944 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
CBWD1-225ENST00000616944 PHF14O94880 888 aa19.01■□□□□ 0.63
CBWD1-225ENST00000616944 GPTP24298 496 aa19.01■□□□□ 0.63
CBWD1-225ENST00000616944 USPL1Q5W0Q7 1092 aa19.01■□□□□ 0.63
CBWD1-225ENST00000616944 UBE3BQ7Z3V4 1068 aa19.01■□□□□ 0.63
CBWD1-225ENST00000616944 SUCLG2Q96I99 432 aa19■□□□□ 0.63
CBWD1-225ENST00000616944 ZPR1O75312 459 aa19■□□□□ 0.63
CBWD1-225ENST00000616944 PCCAP05165 728 aaPredicted RBP19■□□□□ 0.63
CBWD1-225ENST00000616944 RFC4P35249 363 aa19■□□□□ 0.63
CBWD1-225ENST00000616944 MTX1Q13505 466 aa19■□□□□ 0.63
CBWD1-225ENST00000616944 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
CBWD1-225ENST00000616944 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
CBWD1-225ENST00000616944 ANO8Q9HCE9 1232 aaPredicted RBP19■□□□□ 0.63
CBWD1-225ENST00000616944 HDAC5Q9UQL6 1122 aa19■□□□□ 0.63
CBWD1-225ENST00000616944 ZBTB38Q8NAP3 1195 aaPredicted RBP18.99■□□□□ 0.63
CBWD1-225ENST00000616944 CDHR2Q9BYE9 1310 aa18.98■□□□□ 0.63
CBWD1-225ENST00000616944 PARP10Q53GL7 1025 aa18.98■□□□□ 0.63
CBWD1-225ENST00000616944 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
CBWD1-225ENST00000616944 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
CBWD1-225ENST00000616944 NIP7Q9Y221 180 aaKnown RBP eCLIP18.98■□□□□ 0.63
CBWD1-225ENST00000616944 PNPLA7Q6ZV29 1317 aa18.97■□□□□ 0.63
CBWD1-225ENST00000616944 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
CBWD1-225ENST00000616944 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
CBWD1-225ENST00000616944 EPHA10Q5JZY3 1008 aa18.97■□□□□ 0.63
CBWD1-225ENST00000616944 TBC1D9BQ66K14 1250 aa18.97■□□□□ 0.63
CBWD1-225ENST00000616944 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
CBWD1-225ENST00000616944 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
CBWD1-225ENST00000616944 SUSD4Q5VX71 490 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 SMC5Q8IY18 1101 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 SSH3Q8TE77 659 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 NTSR2O95665 410 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 GYS1P13807 737 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 POLA2Q14181 598 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 SLC15A2Q16348 729 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
CBWD1-225ENST00000616944 FOXO4P98177 505 aa18.95■□□□□ 0.62
CBWD1-225ENST00000616944 PPP1R42Q7Z4L9 355 aa18.95■□□□□ 0.62
CBWD1-225ENST00000616944 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
CBWD1-225ENST00000616944 FLAD1Q8NFF5 587 aa18.95■□□□□ 0.62
CBWD1-225ENST00000616944 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
CBWD1-225ENST00000616944 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
CBWD1-225ENST00000616944 HMMRO75330 724 aa18.94■□□□□ 0.62
CBWD1-225ENST00000616944 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
CBWD1-225ENST00000616944 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
CBWD1-225ENST00000616944 TRMT112Q9UI30 125 aaKnown RBP18.94■□□□□ 0.62
CBWD1-225ENST00000616944 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
CBWD1-225ENST00000616944 SH3TC1Q8TE82 1336 aa18.93■□□□□ 0.62
CBWD1-225ENST00000616944 DCTPP1Q9H773 170 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 SRGAP3O43295 1099 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 NFIXQ14938 502 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 CARMIL3Q8ND23 1372 aa18.92■□□□□ 0.62
CBWD1-225ENST00000616944 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
CBWD1-225ENST00000616944 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
CBWD1-225ENST00000616944 IRS4O14654 1257 aaPredicted RBP18.9■□□□□ 0.62
CBWD1-225ENST00000616944 TM4SF1P30408 202 aa18.89■□□□□ 0.62
CBWD1-225ENST00000616944 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
CBWD1-225ENST00000616944 CSF1RP07333 972 aa18.89■□□□□ 0.61
CBWD1-225ENST00000616944 RFX5P48382 616 aaPredicted RBP18.89■□□□□ 0.61
CBWD1-225ENST00000616944 LMBR1LQ6UX01 489 aa18.89■□□□□ 0.61
CBWD1-225ENST00000616944 ANKRD31Q8N7Z5 1873 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 LRP5O75197 1615 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 ABCC12Q96J65 1359 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 PDE8AO60658 829 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 RIC1Q4ADV7 1423 aa18.88■□□□□ 0.61
CBWD1-225ENST00000616944 CTSWP56202 376 aa18.87■□□□□ 0.61
CBWD1-225ENST00000616944 TTLL11Q8NHH1 800 aa18.87■□□□□ 0.61
CBWD1-225ENST00000616944 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
CBWD1-225ENST00000616944 SPEF2Q9C093 1822 aa18.87■□□□□ 0.61
CBWD1-225ENST00000616944 TAF1P21675 1872 aa18.87■□□□□ 0.61
CBWD1-225ENST00000616944 NUCB1Q02818 461 aa18.86■□□□□ 0.61
CBWD1-225ENST00000616944 DDR1Q08345 913 aa18.86■□□□□ 0.61
CBWD1-225ENST00000616944 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
CBWD1-225ENST00000616944 SLC10A5Q5PT55 438 aa18.86■□□□□ 0.61
CBWD1-225ENST00000616944 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
CBWD1-225ENST00000616944 NLGN1Q8N2Q7 840 aa18.86■□□□□ 0.61
CBWD1-225ENST00000616944 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
CBWD1-225ENST00000616944 HCLS1P14317 486 aaPredicted RBP18.85■□□□□ 0.61
CBWD1-225ENST00000616944 COPRSQ9NQ92 184 aa18.85■□□□□ 0.61
CBWD1-225ENST00000616944 PDZRN3Q9UPQ7 1066 aa18.85■□□□□ 0.61
CBWD1-225ENST00000616944 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms