RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
MALAT1-208ENST00000616527 SSH1Q8WYL5 1049 aa10.04□□□□□ -0.8
MALAT1-208ENST00000616527 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
MALAT1-208ENST00000616527 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
MALAT1-208ENST00000616527 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
MALAT1-208ENST00000616527 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
MALAT1-208ENST00000616527 FCF1Q9Y324 198 aaKnown RBP10.04□□□□□ -0.8
MALAT1-208ENST00000616527 ATF3P18847 181 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
MALAT1-208ENST00000616527 NCAPD2Q15021 1401 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 AEBP1Q8IUX7 1158 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
MALAT1-208ENST00000616527 MARF1Q9Y4F3 1742 aaKnown RBP10.03□□□□□ -0.8
MALAT1-208ENST00000616527 CRB1P82279 1406 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 MMP16P51512 607 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 DDX19BQ9UMR2 479 aa10.02□□□□□ -0.81
MALAT1-208ENST00000616527 GCP02774 474 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 TRIM27P14373 513 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 RPIAP49247 311 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 PANK1Q8TE04 598 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 FRAT1Q92837 279 aaPredicted RBP10.01□□□□□ -0.81
MALAT1-208ENST00000616527 LMTK3Q96Q04 1460 aa10.01□□□□□ -0.81
MALAT1-208ENST00000616527 FOXO3O43524 673 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 RLBP1P12271 317 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 MTHFSDQ2M296 383 aaKnown RBP10□□□□□ -0.81
MALAT1-208ENST00000616527 TRIM67Q6ZTA4 783 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 COG6Q9Y2V7 657 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 ABCC6O95255 1503 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 NPHP3Q7Z494 1330 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 MSH6P52701 1360 aa10□□□□□ -0.81
MALAT1-208ENST00000616527 TRPM3Q9HCF6 1732 aaPredicted RBP9.99□□□□□ -0.81
MALAT1-208ENST00000616527 FDX1P10109 184 aa9.99□□□□□ -0.81
MALAT1-208ENST00000616527 TWISTNBQ3B726 338 aaPredicted RBP9.99□□□□□ -0.81
MALAT1-208ENST00000616527 FTSJ3Q8IY81 847 aaKnown RBP9.99□□□□□ -0.81
MALAT1-208ENST00000616527 RTF1Q92541 710 aaKnown RBP9.99□□□□□ -0.81
MALAT1-208ENST00000616527 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
MALAT1-208ENST00000616527 NOB1Q9ULX3 412 aaKnown RBP9.99□□□□□ -0.81
MALAT1-208ENST00000616527 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 DXOO77932 396 aaKnown RBP9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PRR20EP86478 221 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PRR20CP86479 221 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PRR20DP86480 221 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PRR20BP86481 221 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PRR20AP86496 221 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 HDAC1Q13547 482 aaPredicted RBP9.98□□□□□ -0.81
MALAT1-208ENST00000616527 AMOTQ4VCS5 1084 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 THUMPD2Q9BTF0 503 aaKnown RBP9.98□□□□□ -0.81
MALAT1-208ENST00000616527 API5Q9BZZ5 524 aaKnown RBP9.98□□□□□ -0.81
MALAT1-208ENST00000616527 RWDD1Q9H446 243 aaPredicted RBP9.98□□□□□ -0.81
MALAT1-208ENST00000616527 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
MALAT1-208ENST00000616527 FAM83GA6ND36 823 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
MALAT1-208ENST00000616527 NUTM2GQ5VZR2 741 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 SYMPKQ92797 1274 aaKnown RBP9.97□□□□□ -0.81
MALAT1-208ENST00000616527 DDRGK1Q96HY6 314 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 BCL2L13Q9BXK5 485 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 ABCC4O15439 1325 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 MAP3K5Q99683 1374 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 OVOS2A0A0G2JMS6 1433 aa9.97□□□□□ -0.81
MALAT1-208ENST00000616527 MOXD2PA6NHM9 499 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 GDF9O60383 454 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 NDUFV2P19404 249 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 TSPYL6Q8N831 410 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 BACH2Q9BYV9 841 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 LAS1LQ9Y4W2 734 aaKnown RBP9.96□□□□□ -0.82
MALAT1-208ENST00000616527 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 PTPRCP08575 1304 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 CPDO75976 1380 aa9.96□□□□□ -0.82
MALAT1-208ENST00000616527 ZBTB24O43167 697 aaPredicted RBP9.95□□□□□ -0.82
MALAT1-208ENST00000616527 IGHDP01880 384 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 HOXB7P09629 217 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 HSPA2P54652 639 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 DCTN1Q14203 1278 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 PLEKHO1Q53GL0 409 aaPredicted RBP9.95□□□□□ -0.82
MALAT1-208ENST00000616527 NBPF6Q5VWK0 638 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 MCM10Q7L590 875 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 NBPF4Q96M43 638 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 SPATA31A3Q5VYP0 1347 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 TNS3Q68CZ2 1445 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
MALAT1-208ENST00000616527 LRRC37A3O60309 1634 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 ALS2Q96Q42 1657 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 DLG5Q8TDM6 1919 aa9.95□□□□□ -0.82
MALAT1-208ENST00000616527 STRCP1A6NGW2 1772 aa9.94□□□□□ -0.82
MALAT1-208ENST00000616527 PXDNQ92626 1479 aa9.94□□□□□ -0.82
MALAT1-208ENST00000616527 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms