RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
MMP28-204ENST00000615136 LMBR1LQ6UX01 489 aa23.3■■□□□ 1.32
MMP28-204ENST00000615136 ECHDC1Q9NTX5 307 aa23.3■■□□□ 1.32
MMP28-204ENST00000615136 DDB1Q16531 1140 aa23.28■■□□□ 1.32
MMP28-204ENST00000615136 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
MMP28-204ENST00000615136 SPATA31A5Q5VU36 1347 aa23.28■■□□□ 1.32
MMP28-204ENST00000615136 SPATA31A7Q8IWB4 1347 aa23.28■■□□□ 1.32
MMP28-204ENST00000615136 SLIT2O94813 1529 aa23.28■■□□□ 1.32
MMP28-204ENST00000615136 GLRX3O76003 335 aaKnown RBP23.28■■□□□ 1.32
MMP28-204ENST00000615136 MARCH10Q8NA82 808 aaPredicted RBP23.28■■□□□ 1.32
MMP28-204ENST00000615136 TEX13AQ9BXU3 409 aaPredicted RBP23.28■■□□□ 1.32
MMP28-204ENST00000615136 CYP19A1P11511 503 aaPredicted RBP23.27■■□□□ 1.32
MMP28-204ENST00000615136 CCDC191Q8NCU4 936 aa23.27■■□□□ 1.32
MMP28-204ENST00000615136 TNPO1Q92973 898 aaKnown RBP23.27■■□□□ 1.32
MMP28-204ENST00000615136 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
MMP28-204ENST00000615136 ANO2Q9NQ90 1003 aa23.27■■□□□ 1.32
MMP28-204ENST00000615136 PALD1Q9ULE6 856 aa23.27■■□□□ 1.32
MMP28-204ENST00000615136 STARD3NLO95772 234 aa23.26■■□□□ 1.31
MMP28-204ENST00000615136 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
MMP28-204ENST00000615136 ACSBG1Q96GR2 724 aa23.26■■□□□ 1.31
MMP28-204ENST00000615136 THRAP3Q9Y2W1 955 aaKnown RBP23.26■■□□□ 1.31
MMP28-204ENST00000615136 UBAP1LF5GYI3 381 aa23.26■■□□□ 1.31
MMP28-204ENST00000615136 HSP90AA1P07900 732 aaKnown RBP23.26■■□□□ 1.31
MMP28-204ENST00000615136 CCDC9Q9Y3X0 531 aaKnown RBP23.26■■□□□ 1.31
MMP28-204ENST00000615136 TFCP2Q12800 502 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 TCIRG1Q13488 830 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 ARXQ96QS3 562 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 FOXD4L1Q9NU39 408 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 TRAK2O60296 914 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 CDCA7Q9BWT1 371 aaPredicted RBP23.25■■□□□ 1.31
MMP28-204ENST00000615136 CHMP3Q9Y3E7 222 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 NWD2Q9ULI1 1742 aa23.25■■□□□ 1.31
MMP28-204ENST00000615136 A0A0G2JS52 829 aa23.24■■□□□ 1.31
MMP28-204ENST00000615136 HLFQ16534 295 aa23.24■■□□□ 1.31
MMP28-204ENST00000615136 GBP4Q96PP9 640 aa23.23■■□□□ 1.31
MMP28-204ENST00000615136 L1TD1Q5T7N2 865 aaKnown RBP23.23■■□□□ 1.31
MMP28-204ENST00000615136 SGSM2O43147 1006 aa23.22■■□□□ 1.31
MMP28-204ENST00000615136 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
MMP28-204ENST00000615136 GPATCH3Q96I76 525 aa23.22■■□□□ 1.31
MMP28-204ENST00000615136 CWC27Q6UX04 472 aaKnown RBP23.21■■□□□ 1.31
MMP28-204ENST00000615136 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
MMP28-204ENST00000615136 DBNLQ9UJU6 430 aaKnown RBP23.21■■□□□ 1.31
MMP28-204ENST00000615136 FSD2A1L4K1 749 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 ATG9AQ7Z3C6 839 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 SYNE4Q8N205 404 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 ZNF594Q96JF6 807 aaPredicted RBP23.2■■□□□ 1.3
MMP28-204ENST00000615136 BOLA2Q9H3K6 86 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 CLEC17AQ6ZS10 378 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 FAM89AQ96GI7 184 aa23.2■■□□□ 1.3
MMP28-204ENST00000615136 BARGINQ6ZT62 677 aa23.19■■□□□ 1.3
MMP28-204ENST00000615136 ST18O60284 1047 aa23.18■■□□□ 1.3
MMP28-204ENST00000615136 PTMSP20962 102 aa23.18■■□□□ 1.3
MMP28-204ENST00000615136 GPTP24298 496 aa23.18■■□□□ 1.3
MMP28-204ENST00000615136 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
MMP28-204ENST00000615136 C8orf37Q96NL8 207 aa23.18■■□□□ 1.3
MMP28-204ENST00000615136 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
MMP28-204ENST00000615136 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
MMP28-204ENST00000615136 LSG1Q9H089 658 aaKnown RBP23.18■■□□□ 1.3
MMP28-204ENST00000615136 FAM98CQ17RN3 349 aaKnown RBP23.17■■□□□ 1.3
MMP28-204ENST00000615136 LRRC24Q50LG9 513 aa23.17■■□□□ 1.3
MMP28-204ENST00000615136 EVI5LQ96CN4 794 aa23.17■■□□□ 1.3
MMP28-204ENST00000615136 EDC3Q96F86 508 aaKnown RBP23.17■■□□□ 1.3
MMP28-204ENST00000615136 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
MMP28-204ENST00000615136 BCL9LQ86UU0 1499 aa23.17■■□□□ 1.3
MMP28-204ENST00000615136 KCNQ2O43526 872 aa23.16■■□□□ 1.3
MMP28-204ENST00000615136 CCDC85AQ96PX6 553 aaPredicted RBP23.16■■□□□ 1.3
MMP28-204ENST00000615136 DBNDD2Q9BQY9 259 aa23.16■■□□□ 1.3
MMP28-204ENST00000615136 NDUFB9Q9Y6M9 179 aa23.16■■□□□ 1.3
MMP28-204ENST00000615136 PUS3Q9BZE2 481 aaKnown RBP23.16■■□□□ 1.3
MMP28-204ENST00000615136 DIAPH3Q9NSV4 1193 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 RAD50Q92878 1312 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
MMP28-204ENST00000615136 SSFA2P28290 1259 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 HSPA4P34932 840 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 NEK4P51957 841 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 NLRP10Q86W26 655 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 NGLY1Q96IV0 654 aa23.15■■□□□ 1.3
MMP28-204ENST00000615136 GOLGA6L3A6NEY3 463 aa23.14■■□□□ 1.29
MMP28-204ENST00000615136 ITPK1Q13572 414 aa23.14■■□□□ 1.29
MMP28-204ENST00000615136 INTS5Q6P9B9 1019 aaKnown RBP23.14■■□□□ 1.29
MMP28-204ENST00000615136 FAM227BQ96M60 508 aa23.14■■□□□ 1.29
MMP28-204ENST00000615136 NUP98P52948 1817 aa23.14■■□□□ 1.29
MMP28-204ENST00000615136 ANKRD36CQ5JPF3 1778 aa23.13■■□□□ 1.29
MMP28-204ENST00000615136 MCCP23508 829 aa23.13■■□□□ 1.29
MMP28-204ENST00000615136 ATP6V1AP38606 617 aa23.13■■□□□ 1.29
MMP28-204ENST00000615136 ZBTB38Q8NAP3 1195 aaPredicted RBP23.13■■□□□ 1.29
MMP28-204ENST00000615136 IL6STP40189 918 aaPredicted RBP23.13■■□□□ 1.29
MMP28-204ENST00000615136 PTH1RQ03431 593 aa23.13■■□□□ 1.29
MMP28-204ENST00000615136 DZIP3Q86Y13 1208 aaKnown RBP23.13■■□□□ 1.29
MMP28-204ENST00000615136 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
MMP28-204ENST00000615136 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
MMP28-204ENST00000615136 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
MMP28-204ENST00000615136 ANAPC15P60006 121 aa23.12■■□□□ 1.29
MMP28-204ENST00000615136 SKOR2Q2VWA4 1001 aaPredicted RBP23.12■■□□□ 1.29
MMP28-204ENST00000615136 CWC22Q9HCG8 908 aaKnown RBP23.12■■□□□ 1.29
MMP28-204ENST00000615136 JCADQ9P266 1359 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 LOC102724428A0A0B4J2F2 783 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms