RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PHF8Q9UPP1 1060 aa20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 USP16Q9Y5T5 823 aa20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 NUTM2BA6NNL0 878 aaPredicted RBP20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 NUTM2EB1AL46 878 aaPredicted RBP20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 NUTM2AQ8IVF1 878 aaPredicted RBP20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 TRMT1Q9NXH9 659 aaKnown RBP20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 SPAG1Q07617 926 aa20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
HMGXB3-206ENST00000613459 TICAM2Q86XR7 235 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 BBXQ8WY36 941 aaPredicted RBP20■□□□□ 0.79
HMGXB3-206ENST00000613459 BAG3O95817 575 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 RPRD2Q5VT52 1461 aaKnown RBP20■□□□□ 0.79
HMGXB3-206ENST00000613459 ZNF165P49910 485 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 CCDC40Q4G0X9 1142 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 TMTC2Q8N394 836 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
HMGXB3-206ENST00000613459 BCCIPQ9P287 314 aaKnown RBP eCLIP20■□□□□ 0.79
HMGXB3-206ENST00000613459 CKAP2LQ8IYA6 745 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
HMGXB3-206ENST00000613459 TMEM67Q5HYA8 995 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 ANKIB1Q9P2G1 1089 aa20■□□□□ 0.79
HMGXB3-206ENST00000613459 TUBB4BP68371 445 aa19.99■□□□□ 0.79
HMGXB3-206ENST00000613459 NME9Q86XW9 330 aa19.99■□□□□ 0.79
HMGXB3-206ENST00000613459 UBA5Q9GZZ9 404 aa19.99■□□□□ 0.79
HMGXB3-206ENST00000613459 ORC3Q9UBD5 711 aaPredicted RBP19.99■□□□□ 0.79
HMGXB3-206ENST00000613459 METAP2P50579 478 aaKnown RBP eCLIP19.99■□□□□ 0.79
HMGXB3-206ENST00000613459 FERMT1Q9BQL6 677 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 PLVAPQ9BX97 442 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 GSTO1P78417 241 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 KCNG4Q8TDN1 519 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 TIGD1Q96MW7 591 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 NBPF7P0C2Y1 421 aaPredicted RBP19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 UBA7P41226 1012 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
HMGXB3-206ENST00000613459 LRSAM1Q6UWE0 723 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 MFSD6Q6ZSS7 791 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 KRT222Q8N1A0 295 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 KRT23Q9C075 422 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 LMAN1P49257 510 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 IFNL2Q8IZJ0 200 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 CEP63Q96MT8 703 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 SPECC1Q5M775 1068 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
HMGXB3-206ENST00000613459 IVLP07476 585 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 GUCY1B3Q02153 619 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 PPM1EQ8WY54 764 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 CNNM2Q9H8M5 875 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 NUCB1Q02818 461 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 SCLT1Q96NL6 688 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 FEZ1Q99689 392 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 PANK2Q9BZ23 570 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 F6X3S4 739 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 CEP112Q8N8E3 955 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 ERMNQ8TAM6 284 aa19.96■□□□□ 0.79
HMGXB3-206ENST00000613459 HSF2BPO75031 334 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 USP37Q86T82 979 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 CTNNA2P26232 953 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 PPP1R42Q7Z4L9 355 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 CPLX3Q8WVH0 158 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 SRRTQ9BXP5 876 aaKnown RBP19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 PRPHP41219 470 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 FERMT2Q96AC1 680 aa19.95■□□□□ 0.78
HMGXB3-206ENST00000613459 FSD2A1L4K1 749 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 CYLC1P35663 651 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 HLTFQ14527 1009 aaKnown RBP eCLIP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 WAPLQ7Z5K2 1190 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 PPP1R1BQ9UD71 204 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 HLA-DOAP06340 250 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 GNAQP50148 359 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 CCT2P78371 535 aaKnown RBP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 C6orf163Q5TEZ5 329 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 CTNNBL1Q8WYA6 563 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 MAATS1Q7Z4T9 603 aa19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 C14orf93Q9H972 538 aaKnown RBP19.94■□□□□ 0.78
HMGXB3-206ENST00000613459 SNX21Q969T3 373 aa19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 RBM27Q9P2N5 1060 aaKnown RBP19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 ALDH1L1O75891 902 aa19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 CRNKL1Q9BZJ0 848 aaKnown RBP19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 UBE4AQ14139 1066 aa19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 EXOC1Q9NV70 894 aa19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 TMX1Q9H3N1 280 aa19.93■□□□□ 0.78
HMGXB3-206ENST00000613459 TMCO5BA8MYB1 307 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 SPATA24Q86W54 205 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 PLB1Q6P1J6 1458 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
HMGXB3-206ENST00000613459 SNRPA1P09661 255 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms