RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PPP1R42Q7Z4L9 355 aa25.28■■□□□ 1.64
CPNE9-205ENST00000613455 ARHGEF1Q92888 912 aaKnown RBP25.28■■□□□ 1.64
CPNE9-205ENST00000613455 GCC1Q96CN9 775 aa25.28■■□□□ 1.64
CPNE9-205ENST00000613455 POLA2Q14181 598 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 CLEC4GQ6UXB4 293 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 DCTPP1Q9H773 170 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 TUBGCP6Q96RT7 1819 aa25.27■■□□□ 1.64
CPNE9-205ENST00000613455 SRP68Q9UHB9 627 aaKnown RBP25.26■■□□□ 1.63
CPNE9-205ENST00000613455 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
CPNE9-205ENST00000613455 PHF14O94880 888 aa25.26■■□□□ 1.63
CPNE9-205ENST00000613455 PCCAP05165 728 aaPredicted RBP25.26■■□□□ 1.63
CPNE9-205ENST00000613455 ADRA2BP18089 450 aa25.26■■□□□ 1.63
CPNE9-205ENST00000613455 HMGB2P26583 209 aaKnown RBP25.26■■□□□ 1.63
CPNE9-205ENST00000613455 PDZRN3Q9UPQ7 1066 aa25.26■■□□□ 1.63
CPNE9-205ENST00000613455 SRGAP3O43295 1099 aa25.25■■□□□ 1.63
CPNE9-205ENST00000613455 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
CPNE9-205ENST00000613455 TRAPPC3LQ5T215 181 aa25.25■■□□□ 1.63
CPNE9-205ENST00000613455 USPL1Q5W0Q7 1092 aa25.25■■□□□ 1.63
CPNE9-205ENST00000613455 ZBTB38Q8NAP3 1195 aaPredicted RBP25.25■■□□□ 1.63
CPNE9-205ENST00000613455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.24■■□□□ 1.63
CPNE9-205ENST00000613455 USP42Q9H9J4 1324 aaKnown RBP25.23■■□□□ 1.63
CPNE9-205ENST00000613455 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 RABL6Q3YEC7 729 aaPredicted RBP25.23■■□□□ 1.63
CPNE9-205ENST00000613455 CAMKK2Q96RR4 588 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 COL24A1Q17RW2 1714 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 SSFA2P28290 1259 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 AKT1S1Q96B36 256 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 FAM89AQ96GI7 184 aa25.23■■□□□ 1.63
CPNE9-205ENST00000613455 NIP7Q9Y221 180 aaKnown RBP eCLIP25.23■■□□□ 1.63
CPNE9-205ENST00000613455 ZPR1O75312 459 aa25.22■■□□□ 1.63
CPNE9-205ENST00000613455 NUCB1Q02818 461 aa25.22■■□□□ 1.63
CPNE9-205ENST00000613455 CDHR2Q9BYE9 1310 aa25.21■■□□□ 1.63
CPNE9-205ENST00000613455 RFC4P35249 363 aa25.21■■□□□ 1.63
CPNE9-205ENST00000613455 FOXO4P98177 505 aa25.21■■□□□ 1.63
CPNE9-205ENST00000613455 EN1Q05925 392 aaPredicted RBP25.21■■□□□ 1.63
CPNE9-205ENST00000613455 PARP10Q53GL7 1025 aa25.21■■□□□ 1.63
CPNE9-205ENST00000613455 SUSD4Q5VX71 490 aa25.21■■□□□ 1.63
CPNE9-205ENST00000613455 EZH2Q15910 746 aaKnown RBP25.2■■□□□ 1.63
CPNE9-205ENST00000613455 SYNE4Q8N205 404 aa25.2■■□□□ 1.63
CPNE9-205ENST00000613455 TRMT112Q9UI30 125 aaKnown RBP25.2■■□□□ 1.63
CPNE9-205ENST00000613455 MYH3P11055 1940 aa25.2■■□□□ 1.62
CPNE9-205ENST00000613455 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
CPNE9-205ENST00000613455 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
CPNE9-205ENST00000613455 EXOC6BQ9Y2D4 811 aa25.19■■□□□ 1.62
CPNE9-205ENST00000613455 LAMB2P55268 1798 aa25.19■■□□□ 1.62
CPNE9-205ENST00000613455 NTSR2O95665 410 aa25.18■■□□□ 1.62
CPNE9-205ENST00000613455 DDX60Q8IY21 1712 aaKnown RBP25.18■■□□□ 1.62
CPNE9-205ENST00000613455 ANKRD45Q5TZF3 282 aa25.17■■□□□ 1.62
CPNE9-205ENST00000613455 CHD1LQ86WJ1 897 aa25.17■■□□□ 1.62
CPNE9-205ENST00000613455 UTP14AQ9BVJ6 771 aaKnown RBP25.17■■□□□ 1.62
CPNE9-205ENST00000613455 LMBR1LQ6UX01 489 aa25.17■■□□□ 1.62
CPNE9-205ENST00000613455 LNPKQ9C0E8 428 aa25.16■■□□□ 1.62
CPNE9-205ENST00000613455 TFCP2L1Q9NZI6 479 aa25.16■■□□□ 1.62
CPNE9-205ENST00000613455 SH3TC1Q8TE82 1336 aa25.16■■□□□ 1.62
CPNE9-205ENST00000613455 PDE4AP27815 886 aa25.15■■□□□ 1.62
CPNE9-205ENST00000613455 BAG6P46379 1132 aa25.15■■□□□ 1.62
CPNE9-205ENST00000613455 SF3B2Q13435 895 aaKnown RBP25.15■■□□□ 1.62
CPNE9-205ENST00000613455 NOP58Q9Y2X3 529 aaKnown RBP25.15■■□□□ 1.62
CPNE9-205ENST00000613455 FAM177BA6PVY3 158 aa25.15■■□□□ 1.62
CPNE9-205ENST00000613455 IRS4O14654 1257 aaPredicted RBP25.15■■□□□ 1.62
CPNE9-205ENST00000613455 RFX5P48382 616 aaPredicted RBP25.15■■□□□ 1.62
CPNE9-205ENST00000613455 RGS3P49796 1198 aa25.15■■□□□ 1.62
CPNE9-205ENST00000613455 PA2G4Q9UQ80 394 aaKnown RBP25.15■■□□□ 1.62
CPNE9-205ENST00000613455 SURF6O75683 361 aaKnown RBP25.14■■□□□ 1.61
CPNE9-205ENST00000613455 BICDL1Q6ZP65 573 aa25.14■■□□□ 1.61
CPNE9-205ENST00000613455 DEFB132Q7Z7B7 95 aa25.14■■□□□ 1.61
CPNE9-205ENST00000613455 PELP1Q8IZL8 1130 aaKnown RBP25.14■■□□□ 1.61
CPNE9-205ENST00000613455 APBB1O00213 710 aa25.13■■□□□ 1.61
CPNE9-205ENST00000613455 GYS1P13807 737 aa25.13■■□□□ 1.61
CPNE9-205ENST00000613455 ANO8Q9HCE9 1232 aaPredicted RBP25.13■■□□□ 1.61
CPNE9-205ENST00000613455 CSF1RP07333 972 aa25.12■■□□□ 1.61
CPNE9-205ENST00000613455 NUTM1Q86Y26 1132 aa25.12■■□□□ 1.61
CPNE9-205ENST00000613455 KLHDC4Q8TBB5 520 aa25.12■■□□□ 1.61
CPNE9-205ENST00000613455 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
CPNE9-205ENST00000613455 QSER1Q2KHR3 1735 aa25.11■■□□□ 1.61
CPNE9-205ENST00000613455 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
CPNE9-205ENST00000613455 CTSWP56202 376 aa25.11■■□□□ 1.61
CPNE9-205ENST00000613455 PTPN12Q05209 780 aaKnown RBP25.11■■□□□ 1.61
CPNE9-205ENST00000613455 CHMP3Q9Y3E7 222 aa25.11■■□□□ 1.61
CPNE9-205ENST00000613455 CASZ1Q86V15 1759 aa25.11■■□□□ 1.61
CPNE9-205ENST00000613455 PDE8AO60658 829 aa25.1■■□□□ 1.61
CPNE9-205ENST00000613455 COL23A1Q86Y22 540 aaPredicted RBP25.1■■□□□ 1.61
CPNE9-205ENST00000613455 COPRSQ9NQ92 184 aa25.1■■□□□ 1.61
CPNE9-205ENST00000613455 RAB11FIP3O75154 756 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 HCLS1P14317 486 aaPredicted RBP25.09■■□□□ 1.61
CPNE9-205ENST00000613455 NFIXQ14938 502 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 LRRCC1Q9C099 1032 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 PNPLA7Q6ZV29 1317 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 HSP90AB4PQ58FF6 505 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 TTLL11Q8NHH1 800 aa25.09■■□□□ 1.61
CPNE9-205ENST00000613455 CARMIL3Q8ND23 1372 aa25.08■■□□□ 1.61
CPNE9-205ENST00000613455 CCDC125Q86Z20 511 aa25.08■■□□□ 1.61
CPNE9-205ENST00000613455 FLAD1Q8NFF5 587 aa25.08■■□□□ 1.61
CPNE9-205ENST00000613455 ERFEQ4G0M1 354 aa25.07■■□□□ 1.6
CPNE9-205ENST00000613455 NYXQ9GZU5 481 aa25.07■■□□□ 1.6
CPNE9-205ENST00000613455 ABCC12Q96J65 1359 aa25.07■■□□□ 1.6
CPNE9-205ENST00000613455 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms