RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 HIP1O00291 1037 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
HPS1-215ENST00000613394 KSR2Q6VAB6 950 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 RAB11FIP4Q86YS3 637 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 EAF2Q96CJ1 260 aaPredicted RBP16.35■□□□□ 0.21
HPS1-215ENST00000613394 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 SDF4Q9BRK5 362 aa16.35■□□□□ 0.21
HPS1-215ENST00000613394 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
HPS1-215ENST00000613394 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 LIG1P18858 919 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 CCDC73Q6ZRK6 1079 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
HPS1-215ENST00000613394 TPCN1Q9ULQ1 816 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
HPS1-215ENST00000613394 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 BRF1Q92994 677 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 DNAJC25Q9H1X3 360 aa16.34■□□□□ 0.21
HPS1-215ENST00000613394 A0A0D9SFI3 127 aa16.33■□□□□ 0.21
HPS1-215ENST00000613394 ME1P48163 572 aa16.33■□□□□ 0.21
HPS1-215ENST00000613394 CHST3Q7LGC8 479 aa16.33■□□□□ 0.21
HPS1-215ENST00000613394 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.21
HPS1-215ENST00000613394 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.21
HPS1-215ENST00000613394 JAK2O60674 1132 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 TYRO3Q06418 890 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 ANKRD1Q15327 319 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 TAF7LQ5H9L4 462 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 ZNF165P49910 485 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 TTC6Q86TZ1 520 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 SIRT1Q96EB6 747 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
HPS1-215ENST00000613394 SLC27A2O14975 620 aa16.32■□□□□ 0.2
HPS1-215ENST00000613394 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
HPS1-215ENST00000613394 IGSF3O75054 1194 aa16.32■□□□□ 0.2
HPS1-215ENST00000613394 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
HPS1-215ENST00000613394 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
HPS1-215ENST00000613394 MTERF4Q7Z6M4 381 aaKnown RBP16.31■□□□□ 0.2
HPS1-215ENST00000613394 KINO60870 393 aaKnown RBP16.31■□□□□ 0.2
HPS1-215ENST00000613394 STK11IPQ8N1F8 1099 aa16.31■□□□□ 0.2
HPS1-215ENST00000613394 PIBF1Q8WXW3 757 aa16.31■□□□□ 0.2
HPS1-215ENST00000613394 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
HPS1-215ENST00000613394 IP6K1Q92551 441 aa16.31■□□□□ 0.2
HPS1-215ENST00000613394 ERCC4Q92889 916 aaPredicted RBP16.31■□□□□ 0.2
HPS1-215ENST00000613394 TRMT1Q9NXH9 659 aaKnown RBP16.31■□□□□ 0.2
HPS1-215ENST00000613394 PREX1Q8TCU6 1659 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 AOX1Q06278 1338 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 A0A087WZG4 1122 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
HPS1-215ENST00000613394 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 A0A087WWV3 80 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 GOLIM4O00461 696 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 PDCL2Q8N4E4 241 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 SNRKQ9NRH2 765 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
HPS1-215ENST00000613394 LRMPQ12912 555 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 Q6ZUG5 572 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
HPS1-215ENST00000613394 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
HPS1-215ENST00000613394 CPLX1O14810 134 aa16.29■□□□□ 0.2
HPS1-215ENST00000613394 POLA2Q14181 598 aa16.29■□□□□ 0.2
HPS1-215ENST00000613394 SSH2Q76I76 1423 aa16.29■□□□□ 0.2
HPS1-215ENST00000613394 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 HAND2P61296 217 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 TTC14Q96N46 770 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 APPP05067 770 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 TFCP2Q12800 502 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 CHGBP05060 677 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 ZNF589Q86UQ0 364 aaPredicted RBP16.28■□□□□ 0.2
HPS1-215ENST00000613394 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
HPS1-215ENST00000613394 GCP02774 474 aa16.27■□□□□ 0.2
HPS1-215ENST00000613394 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
HPS1-215ENST00000613394 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
HPS1-215ENST00000613394 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.19
HPS1-215ENST00000613394 TPM3P06753 285 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 TNNT1P13805 278 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 TOMM22Q9NS69 142 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.27■□□□□ 0.19
HPS1-215ENST00000613394 V9GYY5 206 aaPredicted RBP16.27■□□□□ 0.19
HPS1-215ENST00000613394 RPAP1Q9BWH6 1393 aaPredicted RBP16.27■□□□□ 0.19
HPS1-215ENST00000613394 BIN1O00499 593 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms