RNA–Protein interactions for RNA: ENST00000613299.1

CRX-207, Transcript of cone-rod homeobox, humanhuman

TSL 3 BASIC

Gene CRX, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-207ENST00000613299 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 FAM177BA6PVY3 158 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 CWC27Q6UX04 472 aaKnown RBP11.32□□□□□ -0.6
CRX-207ENST00000613299 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 AHDC1Q5TGY3 1603 aaPredicted RBP11.32□□□□□ -0.6
CRX-207ENST00000613299 CHMLP26374 656 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 TTC39AQ5SRH9 613 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 SNX21Q969T3 373 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
CRX-207ENST00000613299 FGD1P98174 961 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 MRC1P22897 1456 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
CRX-207ENST00000613299 H7C1W4 665 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
CRX-207ENST00000613299 NEK4P51957 841 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 VPS72Q15906 364 aa11.31□□□□□ -0.6
CRX-207ENST00000613299 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 SIK1P57059 783 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 TFCP2Q12800 502 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
CRX-207ENST00000613299 MPHOSPH8Q99549 860 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 PHLPP1O60346 1717 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 EYA2O00167 538 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
CRX-207ENST00000613299 ANAPC15P60006 121 aa11.3□□□□□ -0.6
CRX-207ENST00000613299 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 PSMA5P28066 241 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 UTP14AQ9BVJ6 771 aaKnown RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 ZPR1O75312 459 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 LDHAL6AQ6ZMR3 332 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
CRX-207ENST00000613299 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
CRX-207ENST00000613299 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
CRX-207ENST00000613299 PKD1L3Q7Z443 1732 aa11.28□□□□□ -0.6
CRX-207ENST00000613299 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
CRX-207ENST00000613299 NUCB2P80303 420 aa11.28□□□□□ -0.6
CRX-207ENST00000613299 TRIM28Q13263 835 aaKnown RBP11.28□□□□□ -0.6
CRX-207ENST00000613299 NOL8Q76FK4 1167 aaKnown RBP11.28□□□□□ -0.6
CRX-207ENST00000613299 PDE8AO60658 829 aa11.28□□□□□ -0.6
CRX-207ENST00000613299 ISCA1Q9BUE6 129 aa11.28□□□□□ -0.6
CRX-207ENST00000613299 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRX-207ENST00000613299 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.6
CRX-207ENST00000613299 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.6
CRX-207ENST00000613299 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.6
CRX-207ENST00000613299 TRPC5Q9UL62 973 aaPredicted RBP11.27□□□□□ -0.6
CRX-207ENST00000613299 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
CRX-207ENST00000613299 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
CRX-207ENST00000613299 BCL9O00512 1426 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 RAD50Q92878 1312 aa11.27□□□□□ -0.61
CRX-207ENST00000613299 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
CRX-207ENST00000613299 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
CRX-207ENST00000613299 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
CRX-207ENST00000613299 EPHA10Q5JZY3 1008 aa11.26□□□□□ -0.61
CRX-207ENST00000613299 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
CRX-207ENST00000613299 CIAO1O76071 339 aa11.26□□□□□ -0.61
CRX-207ENST00000613299 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
CRX-207ENST00000613299 SASH1O94885 1247 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 ATP5JP18859 108 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
CRX-207ENST00000613299 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
CRX-207ENST00000613299 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 SGSM2O43147 1006 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 AK7Q96M32 723 aa11.25□□□□□ -0.61
CRX-207ENST00000613299 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
CRX-207ENST00000613299 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
CRX-207ENST00000613299 SLC5A1P13866 664 aa11.24□□□□□ -0.61
CRX-207ENST00000613299 KRT32Q14532 448 aa11.24□□□□□ -0.61
CRX-207ENST00000613299 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
CRX-207ENST00000613299 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
CRX-207ENST00000613299 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
CRX-207ENST00000613299 ITGA6P23229 1130 aa11.24□□□□□ -0.61
CRX-207ENST00000613299 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms