RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
CDH1-213ENST00000612417 BARGINQ6ZT62 677 aa17.8■□□□□ 0.44
CDH1-213ENST00000612417 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
CDH1-213ENST00000612417 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
CDH1-213ENST00000612417 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
CDH1-213ENST00000612417 USP42Q9H9J4 1324 aaKnown RBP17.8■□□□□ 0.44
CDH1-213ENST00000612417 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 SRGAP3O43295 1099 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 MTX1Q13505 466 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
CDH1-213ENST00000612417 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 MYD88Q99836 296 aa17.79■□□□□ 0.44
CDH1-213ENST00000612417 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
CDH1-213ENST00000612417 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
CDH1-213ENST00000612417 HSPA1LP34931 641 aa17.78■□□□□ 0.44
CDH1-213ENST00000612417 HSPA4P34932 840 aa17.78■□□□□ 0.44
CDH1-213ENST00000612417 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
CDH1-213ENST00000612417 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
CDH1-213ENST00000612417 BCL9O00512 1426 aa17.78■□□□□ 0.44
CDH1-213ENST00000612417 VPS72Q15906 364 aa17.78■□□□□ 0.44
CDH1-213ENST00000612417 MARCH10Q8NA82 808 aaPredicted RBP17.78■□□□□ 0.44
CDH1-213ENST00000612417 TEX13AQ9BXU3 409 aaPredicted RBP17.78■□□□□ 0.44
CDH1-213ENST00000612417 LRP6O75581 1613 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 DNAJC10Q8IXB1 793 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 USP21Q9UK80 565 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 HDAC5Q9UQL6 1122 aa17.77■□□□□ 0.44
CDH1-213ENST00000612417 RAD50Q92878 1312 aa17.77■□□□□ 0.43
CDH1-213ENST00000612417 GRM8O00222 908 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 BRD1O95696 1058 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 IGKV5-2P06315 115 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 PPP1R9BQ96SB3 815 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
CDH1-213ENST00000612417 DOT1LQ8TEK3 1739 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 SGSM2O43147 1006 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
CDH1-213ENST00000612417 CCDC173Q0VFZ6 552 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 GLIPR1L2Q4G1C9 344 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 PLBD2Q8NHP8 589 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 IL25Q9H293 177 aa17.76■□□□□ 0.43
CDH1-213ENST00000612417 NEURL1BA8MQ27 555 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 STARD3NLO95772 234 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
CDH1-213ENST00000612417 CNTROBQ8N137 903 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 FNBP4Q8N3X1 1017 aaPredicted RBP17.75■□□□□ 0.43
CDH1-213ENST00000612417 ESPNB1AK53 854 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 TTLL7Q6ZT98 887 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
CDH1-213ENST00000612417 AFDNP55196 1824 aaKnown RBP17.74■□□□□ 0.43
CDH1-213ENST00000612417 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
CDH1-213ENST00000612417 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
CDH1-213ENST00000612417 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
CDH1-213ENST00000612417 GCKRQ14397 625 aa17.73■□□□□ 0.43
CDH1-213ENST00000612417 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
CDH1-213ENST00000612417 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
CDH1-213ENST00000612417 MBD3O95983 291 aa17.72■□□□□ 0.43
CDH1-213ENST00000612417 LSG1Q9H089 658 aaKnown RBP17.72■□□□□ 0.43
CDH1-213ENST00000612417 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
CDH1-213ENST00000612417 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
CDH1-213ENST00000612417 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
CDH1-213ENST00000612417 UTYO14607 1347 aa17.71■□□□□ 0.43
CDH1-213ENST00000612417 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
CDH1-213ENST00000612417 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
CDH1-213ENST00000612417 ANP32BQ92688 251 aaKnown RBP17.7■□□□□ 0.42
CDH1-213ENST00000612417 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
CDH1-213ENST00000612417 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
CDH1-213ENST00000612417 TTC14Q96N46 770 aa17.7■□□□□ 0.42
CDH1-213ENST00000612417 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
CDH1-213ENST00000612417 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
CDH1-213ENST00000612417 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
CDH1-213ENST00000612417 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
CDH1-213ENST00000612417 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
CDH1-213ENST00000612417 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
CDH1-213ENST00000612417 TCHHQ07283 1943 aa17.69■□□□□ 0.42
CDH1-213ENST00000612417 A0A087WZG4 1122 aa17.68■□□□□ 0.42
CDH1-213ENST00000612417 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
CDH1-213ENST00000612417 UBE3BQ7Z3V4 1068 aa17.68■□□□□ 0.42
CDH1-213ENST00000612417 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
CDH1-213ENST00000612417 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
CDH1-213ENST00000612417 RUFY2Q8WXA3 655 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 ECHDC1Q9NTX5 307 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 AFF2P51816 1311 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 KCNQ2O43526 872 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 LRSAM1Q6UWE0 723 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
CDH1-213ENST00000612417 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
CDH1-213ENST00000612417 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.66■□□□□ 0.42
CDH1-213ENST00000612417 ATP6V1AP38606 617 aa17.66■□□□□ 0.42
CDH1-213ENST00000612417 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms