RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 ERCC3P19447 782 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 AKAP2Q9Y2D5 859 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 DPH6Q7L8W6 267 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCDC113Q9H0I3 377 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 ANKIB1Q9P2G1 1089 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 U3KPZ7 1027 aaPredicted RBP10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 GOLIM4O00461 696 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 FERP16591 822 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 WASF1Q92558 559 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 GDPD2Q9HCC8 539 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 SSFA2P28290 1259 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCDC91Q7Z6B0 441 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 HAUS7Q99871 368 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 PUF60Q9UHX1 559 aaKnown RBP10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 STIM1Q13586 685 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 INCENPQ9NQS7 918 aa10.94□□□□□ -0.66
SRGAP2B-204ENST00000612199 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 NAPBQ9H115 298 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 PPME1Q9Y570 386 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 FAM177A1Q8N128 213 aaPredicted RBP10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 PLEKHH1Q9ULM0 1364 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 LDHAL6AQ6ZMR3 332 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 FAM193AP78312 1265 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 PPFIBP1Q86W92 1011 aa10.93□□□□□ -0.66
SRGAP2B-204ENST00000612199 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 ZSCAN30Q86W11 494 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 ECHDC1Q9NTX5 307 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 ASXL1Q8IXJ9 1541 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 CAVIN4Q5BKX8 364 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 GIMAP7Q8NHV1 300 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 HAND2P61296 217 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 SLC4A8Q2Y0W8 1093 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 NDC80O14777 642 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 CRACR2BQ8N4Y2 399 aaPredicted RBP10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 RLBP1P12271 317 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 ERCC5P28715 1186 aaPredicted RBP10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCDC117Q8IWD4 279 aaPredicted RBP10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCDC150Q8NCX0 1101 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 ODF2LQ9ULJ1 636 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 RIMS2Q9UQ26 1411 aa10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 MTHFSDQ2M296 383 aaKnown RBP10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 LUC7LQ9NQ29 371 aaKnown RBP10.92□□□□□ -0.66
SRGAP2B-204ENST00000612199 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 PSMC4P43686 418 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 PLS1Q14651 629 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 ANKRD13DQ6ZTN6 518 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 CFAP57Q96MR6 1250 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 SFMBT1Q9UHJ3 866 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 ANKRD18BA2A2Z9 1011 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 UBA5Q9GZZ9 404 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 RANBP6O60518 1105 aaKnown RBP10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 COPS6Q7L5N1 327 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 ZNF518AQ6AHZ1 1483 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 HSPA2P54652 639 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 SEPT8Q92599 483 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 ACSBG1Q96GR2 724 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 CTTNBP2Q8WZ74 1663 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 KIAA0556O60303 1618 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 NUP160Q12769 1436 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 SMTNL1A8MU46 457 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 FEZ1Q99689 392 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 LIMCH1Q9UPQ0 1083 aa10.91□□□□□ -0.66
SRGAP2B-204ENST00000612199 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 GTF2F1P35269 517 aaKnown RBP eCLIP10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 DDX46Q7L014 1031 aaKnown RBP10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 CWC25Q9NXE8 425 aaPredicted RBP10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 ITSN2Q9NZM3 1697 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 PPFIA1Q13136 1202 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 TXLNBQ8N3L3 684 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 TCEANC2Q96MN5 208 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 ZNF213O14771 459 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 CTNNA2P26232 953 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 MAP3K12Q12852 859 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 SLC9A5Q14940 896 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 MKNK2Q9HBH9 465 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 TNIP1Q15025 636 aa10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 TFIP11Q9UBB9 837 aaKnown RBP10.9□□□□□ -0.66
SRGAP2B-204ENST00000612199 FNDC3AQ9Y2H6 1198 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms