RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
CBWD1-220ENST00000612045 PA2G4Q9UQ80 394 aaKnown RBP15.22■□□□□ 0.03
CBWD1-220ENST00000612045 NUP98P52948 1817 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 LY75O60449 1722 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 GPTP24298 496 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 FOXO4P98177 505 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 NLRP10Q86W26 655 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 RHPN1Q8TCX5 695 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 FBXO41Q8TF61 875 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 KIF1BPQ96EK5 621 aa15.21■□□□□ 0.03
CBWD1-220ENST00000612045 CAMTA2O94983 1202 aa15.2■□□□□ 0.02
CBWD1-220ENST00000612045 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
CBWD1-220ENST00000612045 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CBWD1-220ENST00000612045 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
CBWD1-220ENST00000612045 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
CBWD1-220ENST00000612045 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
CBWD1-220ENST00000612045 ZBTB38Q8NAP3 1195 aaPredicted RBP15.2■□□□□ 0.02
CBWD1-220ENST00000612045 RXRBP28702 533 aa15.19■□□□□ 0.02
CBWD1-220ENST00000612045 ERC1Q8IUD2 1116 aa15.19■□□□□ 0.02
CBWD1-220ENST00000612045 FAM89AQ96GI7 184 aa15.19■□□□□ 0.02
CBWD1-220ENST00000612045 IL1RAPL2Q9NP60 686 aa15.19■□□□□ 0.02
CBWD1-220ENST00000612045 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
CBWD1-220ENST00000612045 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
CBWD1-220ENST00000612045 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
CBWD1-220ENST00000612045 OSBPL3Q9H4L5 887 aa15.18■□□□□ 0.02
CBWD1-220ENST00000612045 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
CBWD1-220ENST00000612045 GSPT1P15170 499 aaKnown RBP15.17■□□□□ 0.02
CBWD1-220ENST00000612045 PDE1AP54750 535 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 TTC22Q5TAA0 569 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 TRIM37O94972 964 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 PTPN12Q05209 780 aaKnown RBP15.17■□□□□ 0.02
CBWD1-220ENST00000612045 PLA2G12BQ9BX93 195 aa15.17■□□□□ 0.02
CBWD1-220ENST00000612045 TAF1LQ8IZX4 1826 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 MX1P20591 662 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 SIL1Q9H173 461 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
CBWD1-220ENST00000612045 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 CDHR2Q9BYE9 1310 aa15.16■□□□□ 0.02
CBWD1-220ENST00000612045 GNPATO15228 680 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 SASH1O94885 1247 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 SEC24BO95487 1268 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
CBWD1-220ENST00000612045 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 CLEC4GQ6UXB4 293 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
CBWD1-220ENST00000612045 LRRC4BQ9NT99 713 aa15.15■□□□□ 0.02
CBWD1-220ENST00000612045 PARP10Q53GL7 1025 aa15.14■□□□□ 0.01
CBWD1-220ENST00000612045 TSHZ3Q63HK5 1081 aa15.14■□□□□ 0.01
CBWD1-220ENST00000612045 NUTM1Q86Y26 1132 aa15.14■□□□□ 0.01
CBWD1-220ENST00000612045 NIP7Q9Y221 180 aaKnown RBP eCLIP15.14■□□□□ 0.01
CBWD1-220ENST00000612045 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
CBWD1-220ENST00000612045 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
CBWD1-220ENST00000612045 RGL2O15211 777 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 CSF1RP07333 972 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 SLC27A3Q5K4L6 730 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 AOX1Q06278 1338 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
CBWD1-220ENST00000612045 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
CBWD1-220ENST00000612045 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
CBWD1-220ENST00000612045 SDSP20132 328 aa15.12■□□□□ 0.01
CBWD1-220ENST00000612045 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
CBWD1-220ENST00000612045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.12■□□□□ 0.01
CBWD1-220ENST00000612045 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
CBWD1-220ENST00000612045 CCDC57Q2TAC2 916 aa15.11■□□□□ 0.01
CBWD1-220ENST00000612045 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
CBWD1-220ENST00000612045 AK7Q96M32 723 aa15.11■□□□□ 0.01
CBWD1-220ENST00000612045 SCN7AQ01118 1682 aa15.11■□□□□ 0.01
CBWD1-220ENST00000612045 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
CBWD1-220ENST00000612045 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 PDE8AO60658 829 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 ZPR1O75312 459 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 CDC45O75419 566 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 CTSWP56202 376 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 AACSQ86V21 672 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 TTLL11Q8NHH1 800 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 ARHGEF1Q92888 912 aaKnown RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 EAF2Q96CJ1 260 aaPredicted RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 NTSR2O95665 410 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 ANP32AP39687 249 aaKnown RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 USPL1Q5W0Q7 1092 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 TBC1D9Q6ZT07 1266 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 PI4K2BQ8TCG2 481 aa15.1■□□□□ 0.01
CBWD1-220ENST00000612045 ZNF594Q96JF6 807 aaPredicted RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
CBWD1-220ENST00000612045 MYH3P11055 1940 aa15.09■□□□□ 0.01
CBWD1-220ENST00000612045 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
CBWD1-220ENST00000612045 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms