RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
CDH4-202ENST00000611855 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
CDH4-202ENST00000611855 USP27XA6NNY8 438 aa13.04□□□□□ -0.32
CDH4-202ENST00000611855 NR1I2O75469 434 aa13.04□□□□□ -0.32
CDH4-202ENST00000611855 ERCC4Q92889 916 aaPredicted RBP13.04□□□□□ -0.32
CDH4-202ENST00000611855 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
CDH4-202ENST00000611855 FBXO38Q6PIJ6 1188 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
CDH4-202ENST00000611855 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
CDH4-202ENST00000611855 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.03□□□□□ -0.32
CDH4-202ENST00000611855 NEO1Q92859 1461 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 ZNF165P49910 485 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
CDH4-202ENST00000611855 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
CDH4-202ENST00000611855 KCNQ3O43525 872 aa13.02□□□□□ -0.32
CDH4-202ENST00000611855 ZNF75DP51815 510 aa13.02□□□□□ -0.32
CDH4-202ENST00000611855 VPS53Q5VIR6 699 aa13.02□□□□□ -0.32
CDH4-202ENST00000611855 DNAJC2Q99543 621 aaKnown RBP13.02□□□□□ -0.32
CDH4-202ENST00000611855 DIP2BQ9P265 1576 aa13.02□□□□□ -0.32
CDH4-202ENST00000611855 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
CDH4-202ENST00000611855 JAK2O60674 1132 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 ZKSCAN1P17029 563 aaPredicted RBP13.02□□□□□ -0.33
CDH4-202ENST00000611855 CAPN2P17655 700 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.33
CDH4-202ENST00000611855 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 SIL1Q9H173 461 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
CDH4-202ENST00000611855 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 AACSQ86V21 672 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 AEBP2Q6ZN18 517 aaPredicted RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 EDC3Q96F86 508 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH4-202ENST00000611855 BOLA2Q9H3K6 86 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
CDH4-202ENST00000611855 AOX1Q06278 1338 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 A2ML1A8K2U0 1454 aa13.01□□□□□ -0.33
CDH4-202ENST00000611855 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
CDH4-202ENST00000611855 POLA2Q14181 598 aa13□□□□□ -0.33
CDH4-202ENST00000611855 NGDNQ8NEJ9 315 aaKnown RBP13□□□□□ -0.33
CDH4-202ENST00000611855 USP16Q9Y5T5 823 aa13□□□□□ -0.33
CDH4-202ENST00000611855 CHGBP05060 677 aa13□□□□□ -0.33
CDH4-202ENST00000611855 HNRNPH2P55795 449 aaKnown RBP13□□□□□ -0.33
CDH4-202ENST00000611855 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
CDH4-202ENST00000611855 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
CDH4-202ENST00000611855 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
CDH4-202ENST00000611855 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
CDH4-202ENST00000611855 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
CDH4-202ENST00000611855 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
CDH4-202ENST00000611855 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
CDH4-202ENST00000611855 PGBD1Q96JS3 809 aa13□□□□□ -0.33
CDH4-202ENST00000611855 SH2B1Q9NRF2 756 aaPredicted RBP13□□□□□ -0.33
CDH4-202ENST00000611855 CWF19L2Q2TBE0 894 aaKnown RBP12.99□□□□□ -0.33
CDH4-202ENST00000611855 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
CDH4-202ENST00000611855 TLR7Q9NYK1 1049 aaKnown RBP12.99□□□□□ -0.33
CDH4-202ENST00000611855 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 A0A0D9SFI3 127 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 NLRP6P59044 892 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
CDH4-202ENST00000611855 SLC27A2O14975 620 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 C11orf57Q6ZUT1 292 aaPredicted RBP12.98□□□□□ -0.33
CDH4-202ENST00000611855 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
CDH4-202ENST00000611855 SKILP12757 684 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 ERCC6LQ2NKX8 1250 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 GOLGA6L19H0YKK7 550 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 SYCP1Q15431 976 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 FSD1Q9BTV5 496 aa12.98□□□□□ -0.33
CDH4-202ENST00000611855 C3P01024 1663 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 OVOS2A0A0J9YW53 1432 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
CDH4-202ENST00000611855 OVOS2Q6IE36 1432 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 PLA2G4DQ86XP0 818 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
CDH4-202ENST00000611855 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 ZNF589Q86UQ0 364 aaPredicted RBP12.97□□□□□ -0.33
CDH4-202ENST00000611855 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
CDH4-202ENST00000611855 MON2Q7Z3U7 1717 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms