RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 CWF19L2Q2TBE0 894 aaKnown RBP20.13■□□□□ 0.81
CLTCL1-207ENST00000611723 USPL1Q5W0Q7 1092 aa20.13■□□□□ 0.81
CLTCL1-207ENST00000611723 SRP68Q9UHB9 627 aaKnown RBP20.13■□□□□ 0.81
CLTCL1-207ENST00000611723 UTYO14607 1347 aa20.12■□□□□ 0.81
CLTCL1-207ENST00000611723 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
CLTCL1-207ENST00000611723 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
CLTCL1-207ENST00000611723 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
CLTCL1-207ENST00000611723 PNPLA7Q6ZV29 1317 aa20.11■□□□□ 0.81
CLTCL1-207ENST00000611723 GNAI3P08754 354 aa20.11■□□□□ 0.81
CLTCL1-207ENST00000611723 CWC25Q9NXE8 425 aaPredicted RBP20.11■□□□□ 0.81
CLTCL1-207ENST00000611723 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
CLTCL1-207ENST00000611723 NLRP10Q86W26 655 aa20.1■□□□□ 0.81
CLTCL1-207ENST00000611723 MEIS3Q99687 375 aa20.1■□□□□ 0.81
CLTCL1-207ENST00000611723 H7C1W4 665 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 GRM8O00222 908 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 GYS1P13807 737 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 C9orf78Q9NZ63 289 aaPredicted RBP20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 HDAC5Q9UQL6 1122 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 SCN7AQ01118 1682 aa20.09■□□□□ 0.81
CLTCL1-207ENST00000611723 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
CLTCL1-207ENST00000611723 NIP7Q9Y221 180 aaKnown RBP eCLIP20.08■□□□□ 0.81
CLTCL1-207ENST00000611723 TUBGCP6Q96RT7 1819 aa20.08■□□□□ 0.8
CLTCL1-207ENST00000611723 UBN2Q6ZU65 1347 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 GPTP24298 496 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 CASP7P55210 303 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 TBC1D9BQ66K14 1250 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
CLTCL1-207ENST00000611723 ANKRD36CQ5JPF3 1778 aa20.06■□□□□ 0.8
CLTCL1-207ENST00000611723 GNAI2P04899 355 aa20.06■□□□□ 0.8
CLTCL1-207ENST00000611723 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
CLTCL1-207ENST00000611723 UBTFL1P0CB47 393 aaPredicted RBP20.06■□□□□ 0.8
CLTCL1-207ENST00000611723 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
CLTCL1-207ENST00000611723 TM4SF1P30408 202 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 GPR162Q16538 588 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 SUSD4Q5VX71 490 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 PPP1R42Q7Z4L9 355 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 NLGN1Q8N2Q7 840 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 SETDB2Q96T68 719 aa20.05■□□□□ 0.8
CLTCL1-207ENST00000611723 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
CLTCL1-207ENST00000611723 UTP14AQ9BVJ6 771 aaKnown RBP20.04■□□□□ 0.8
CLTCL1-207ENST00000611723 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
CLTCL1-207ENST00000611723 UTRNP46939 3433 aa20.04■□□□□ 0.8
CLTCL1-207ENST00000611723 NFIXQ14938 502 aa20.03■□□□□ 0.8
CLTCL1-207ENST00000611723 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
CLTCL1-207ENST00000611723 PCDHB15Q9Y5E8 787 aa20.03■□□□□ 0.8
CLTCL1-207ENST00000611723 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 MSH5O43196 834 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 NTSR2O95665 410 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 UBE3BQ7Z3V4 1068 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 SLC16A10Q8TF71 515 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 KAZALD1Q96I82 304 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 TRMT112Q9UI30 125 aaKnown RBP20.02■□□□□ 0.8
CLTCL1-207ENST00000611723 RPAP2Q8IXW5 612 aaPredicted RBP20.01■□□□□ 0.79
CLTCL1-207ENST00000611723 SUCLG2Q96I99 432 aa20.01■□□□□ 0.79
CLTCL1-207ENST00000611723 NYXQ9GZU5 481 aa20.01■□□□□ 0.79
CLTCL1-207ENST00000611723 LRRFIP2Q9Y608 721 aaKnown RBP20.01■□□□□ 0.79
CLTCL1-207ENST00000611723 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 BICDL1Q6ZP65 573 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 JARID2Q92833 1246 aaPredicted RBP20■□□□□ 0.79
CLTCL1-207ENST00000611723 FAM89AQ96GI7 184 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 C1orf115Q9H7X2 142 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 SH3TC1Q8TE82 1336 aa20■□□□□ 0.79
CLTCL1-207ENST00000611723 CARMIL3Q8ND23 1372 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 CEP85Q6P2H3 762 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 ANKRD44Q8N8A2 993 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
CLTCL1-207ENST00000611723 HSP90B1P14625 803 aaKnown RBP19.98■□□□□ 0.79
CLTCL1-207ENST00000611723 MTX1Q13505 466 aa19.98■□□□□ 0.79
CLTCL1-207ENST00000611723 RABL6Q3YEC7 729 aaPredicted RBP19.98■□□□□ 0.79
CLTCL1-207ENST00000611723 POLRMTO00411 1230 aaKnown RBP19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 IRS4O14654 1257 aaPredicted RBP19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 FOXO4P98177 505 aa19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 HDAC1Q13547 482 aaPredicted RBP19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 EPHA10Q5JZY3 1008 aa19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 NBPF5PQ86XG9 351 aaPredicted RBP19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 SIRT2Q8IXJ6 389 aa19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
CLTCL1-207ENST00000611723 PDE8AO60658 829 aa19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 SERPINB2P05120 415 aa19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 DDR1Q08345 913 aa19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 RTL5Q5HYW3 569 aaPredicted RBP19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 BICC1Q9H694 974 aaKnown RBP19.96■□□□□ 0.79
CLTCL1-207ENST00000611723 FAM177BA6PVY3 158 aa19.95■□□□□ 0.78
CLTCL1-207ENST00000611723 CSF1RP07333 972 aa19.95■□□□□ 0.78
CLTCL1-207ENST00000611723 RWDD1Q9H446 243 aaPredicted RBP19.95■□□□□ 0.78
CLTCL1-207ENST00000611723 YBX3P16989 372 aaKnown RBP eCLIP19.94■□□□□ 0.78
CLTCL1-207ENST00000611723 POLA2Q14181 598 aa19.94■□□□□ 0.78
CLTCL1-207ENST00000611723 ERFEQ4G0M1 354 aa19.94■□□□□ 0.78
CLTCL1-207ENST00000611723 NUTM1Q86Y26 1132 aa19.94■□□□□ 0.78
CLTCL1-207ENST00000611723 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
CLTCL1-207ENST00000611723 MMP10P09238 476 aa19.93■□□□□ 0.78
CLTCL1-207ENST00000611723 POLD1P28340 1107 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms