RNA–Protein interactions for RNA: ENST00000611578.4

EPHB6-207, Transcript of EPH receptor B6, humanhuman

TSL 1 (best)

Gene EPHB6, Length 3,224 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-207ENST00000611578 FEZ1Q99689 392 aa15.35■□□□□ 0.05
EPHB6-207ENST00000611578 RBM8AQ9Y5S9 174 aaKnown RBP15.35■□□□□ 0.05
EPHB6-207ENST00000611578 SOS1Q07889 1333 aaPredicted RBP15.35■□□□□ 0.05
EPHB6-207ENST00000611578 JAK2O60674 1132 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 SDF4Q9BRK5 362 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 FTOQ9C0B1 505 aaKnown RBP eCLIP15.34■□□□□ 0.05
EPHB6-207ENST00000611578 CTNNA3Q9UI47 895 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
EPHB6-207ENST00000611578 PTPN21Q16825 1174 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
EPHB6-207ENST00000611578 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
EPHB6-207ENST00000611578 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
EPHB6-207ENST00000611578 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
EPHB6-207ENST00000611578 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
EPHB6-207ENST00000611578 TNRQ92752 1358 aa15.33■□□□□ 0.04
EPHB6-207ENST00000611578 SKIDA1Q1XH10 827 aa15.33■□□□□ 0.04
EPHB6-207ENST00000611578 ANKRD7Q92527 254 aa15.33■□□□□ 0.04
EPHB6-207ENST00000611578 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 ME1P48163 572 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 ERCC6LQ2NKX8 1250 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 STK11IPQ8N1F8 1099 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 EDC3Q96F86 508 aaKnown RBP15.32■□□□□ 0.04
EPHB6-207ENST00000611578 CCDC66A2RUB6 948 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 LTKP29376 864 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 CCT2P78371 535 aaKnown RBP15.32■□□□□ 0.04
EPHB6-207ENST00000611578 SF3A1Q15459 793 aaKnown RBP15.32■□□□□ 0.04
EPHB6-207ENST00000611578 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 GPATCH3Q96I76 525 aa15.32■□□□□ 0.04
EPHB6-207ENST00000611578 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
EPHB6-207ENST00000611578 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
EPHB6-207ENST00000611578 PRR36Q9H6K5 1346 aa15.31■□□□□ 0.04
EPHB6-207ENST00000611578 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
EPHB6-207ENST00000611578 KIF18AQ8NI77 898 aa15.31■□□□□ 0.04
EPHB6-207ENST00000611578 PDCP20941 246 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 AOPEPQ8N6M6 819 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 TTC14Q96N46 770 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 FUCA2Q9BTY2 467 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 MAP3K19Q56UN5 1328 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 CREB3L3Q68CJ9 461 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 FBXO38Q6PIJ6 1188 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 BRF1Q92994 677 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 SCAND2PQ9GZW5 306 aaPredicted RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 AGLP35573 1532 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 C11orf57Q6ZUT1 292 aaPredicted RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 RAB11FIP4Q86YS3 637 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 DNAJC2Q99543 621 aaKnown RBP15.3■□□□□ 0.04
EPHB6-207ENST00000611578 TAF6LQ9Y6J9 622 aa15.3■□□□□ 0.04
EPHB6-207ENST00000611578 GLRX3O76003 335 aaKnown RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 TEFQ10587 303 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 CCAR1Q8IX12 1150 aaKnown RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 PI4K2BQ8TCG2 481 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 IPO4Q8TEX9 1081 aaKnown RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 SH2B1Q9NRF2 756 aaPredicted RBP15.29■□□□□ 0.04
EPHB6-207ENST00000611578 ROBO2Q9HCK4 1378 aa15.29■□□□□ 0.04
EPHB6-207ENST00000611578 TMC6Q7Z403 805 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 MNS1Q8NEH6 495 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 DDX41Q9UJV9 622 aaKnown RBP15.28■□□□□ 0.04
EPHB6-207ENST00000611578 ACEP12821 1306 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 CHST3Q7LGC8 479 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
EPHB6-207ENST00000611578 CHPF2Q9P2E5 772 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 KNDC1Q76NI1 1749 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 EDC4Q6P2E9 1401 aaKnown RBP15.28■□□□□ 0.04
EPHB6-207ENST00000611578 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
EPHB6-207ENST00000611578 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 LRRC8AQ8IWT6 810 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 ZSWIM4Q9H7M6 989 aa15.28■□□□□ 0.04
EPHB6-207ENST00000611578 DDX19AQ9NUU7 478 aaKnown RBP15.28■□□□□ 0.04
EPHB6-207ENST00000611578 ATP7BP35670 1465 aa15.27■□□□□ 0.04
EPHB6-207ENST00000611578 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.04
EPHB6-207ENST00000611578 SNW1Q13573 536 aaKnown RBP15.27■□□□□ 0.04
EPHB6-207ENST00000611578 RNF20Q5VTR2 975 aa15.27■□□□□ 0.04
EPHB6-207ENST00000611578 EID1Q9Y6B2 187 aa15.27■□□□□ 0.04
EPHB6-207ENST00000611578 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 MAP2P11137 1827 aaKnown RBP15.27■□□□□ 0.03
EPHB6-207ENST00000611578 HTATSF1O43719 755 aaKnown RBP15.27■□□□□ 0.03
EPHB6-207ENST00000611578 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.03
EPHB6-207ENST00000611578 PSMA5P28066 241 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 NLRP6P59044 892 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 TERF2Q15554 542 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.03
EPHB6-207ENST00000611578 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 KIF24Q5T7B8 1368 aa15.27■□□□□ 0.03
EPHB6-207ENST00000611578 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
EPHB6-207ENST00000611578 ARHGAP29Q52LW3 1261 aa15.26■□□□□ 0.03
EPHB6-207ENST00000611578 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms