RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ATP5J2-PTCD1G3V325 749 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 PTCD1O75127 700 aaKnown RBP14.39□□□□□ -0.11
SRRT-213ENST00000611405 KLHDC4Q8TBB5 520 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 KCPQ6ZWJ8 1503 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 PTPN12Q05209 780 aaKnown RBP14.39□□□□□ -0.11
SRRT-213ENST00000611405 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 DDX54Q8TDD1 881 aaKnown RBP14.39□□□□□ -0.11
SRRT-213ENST00000611405 UBR2Q8IWV8 1755 aa14.39□□□□□ -0.11
SRRT-213ENST00000611405 H7C1W4 665 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 MRE11P49959 708 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 KCNB2Q92953 911 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 PAPPAQ13219 1627 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
SRRT-213ENST00000611405 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 TLR7Q9NYK1 1049 aaKnown RBP14.38□□□□□ -0.11
SRRT-213ENST00000611405 AFDNP55196 1824 aaKnown RBP14.38□□□□□ -0.11
SRRT-213ENST00000611405 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
SRRT-213ENST00000611405 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 TTC14Q96N46 770 aa14.38□□□□□ -0.11
SRRT-213ENST00000611405 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
SRRT-213ENST00000611405 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
SRRT-213ENST00000611405 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
SRRT-213ENST00000611405 NOL8Q76FK4 1167 aaKnown RBP14.37□□□□□ -0.11
SRRT-213ENST00000611405 TM6SF1Q9BZW5 370 aa14.37□□□□□ -0.11
SRRT-213ENST00000611405 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
SRRT-213ENST00000611405 BRD1O95696 1058 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 A1BGP04217 495 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 PTH1RQ03431 593 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 TNNI3KQ59H18 835 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 TTLL7Q6ZT98 887 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 LMBRD1Q9NUN5 540 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 FPGT-TNNI3KV9GXZ4 949 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 CCDC171Q6TFL3 1326 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 ATP5JP18859 108 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 TFCP2Q12800 502 aa14.36□□□□□ -0.11
SRRT-213ENST00000611405 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
SRRT-213ENST00000611405 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 FSD1Q9BTV5 496 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 LIMCH1Q9UPQ0 1083 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 FOXO4P98177 505 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 LMBR1LQ6UX01 489 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 TMOD3Q9NYL9 352 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 NECTIN1Q15223 517 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 PRPF40BQ6NWY9 871 aaKnown RBP14.35□□□□□ -0.11
SRRT-213ENST00000611405 GRPEL1Q9HAV7 217 aa14.35□□□□□ -0.11
SRRT-213ENST00000611405 ZKSCAN1P17029 563 aaPredicted RBP14.34□□□□□ -0.11
SRRT-213ENST00000611405 AK2P54819 239 aa14.34□□□□□ -0.11
SRRT-213ENST00000611405 MAP4K1Q92918 833 aa14.34□□□□□ -0.11
SRRT-213ENST00000611405 FAM227BQ96M60 508 aa14.34□□□□□ -0.11
SRRT-213ENST00000611405 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
SRRT-213ENST00000611405 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
SRRT-213ENST00000611405 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
SRRT-213ENST00000611405 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
SRRT-213ENST00000611405 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
SRRT-213ENST00000611405 NUP188Q5SRE5 1749 aa14.33□□□□□ -0.11
SRRT-213ENST00000611405 RBM8AQ9Y5S9 174 aaKnown RBP14.33□□□□□ -0.12
SRRT-213ENST00000611405 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
SRRT-213ENST00000611405 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
SRRT-213ENST00000611405 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
SRRT-213ENST00000611405 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
SRRT-213ENST00000611405 KCNJ4P48050 445 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 RUFY3Q7L099 469 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 PDRG1Q9NUG6 133 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 MED23Q9ULK4 1368 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
SRRT-213ENST00000611405 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
SRRT-213ENST00000611405 ZSCAN31Q96LW9 406 aaPredicted RBP14.32□□□□□ -0.12
SRRT-213ENST00000611405 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
SRRT-213ENST00000611405 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
SRRT-213ENST00000611405 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 HAUS7Q99871 368 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 ISCA1Q9BUE6 129 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 ATG3Q9NT62 314 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 BTG4Q9NY30 223 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 PSMA5P28066 241 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
SRRT-213ENST00000611405 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
SRRT-213ENST00000611405 SH2B1Q9NRF2 756 aaPredicted RBP14.31□□□□□ -0.12
SRRT-213ENST00000611405 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 JCADQ9P266 1359 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 SLC27A2O14975 620 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 NCLP19338 710 aaKnown RBP14.3□□□□□ -0.12
SRRT-213ENST00000611405 TRIM28Q13263 835 aaKnown RBP14.3□□□□□ -0.12
SRRT-213ENST00000611405 TCIRG1Q13488 830 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 FOXD4L5Q5VV16 416 aaPredicted RBP14.3□□□□□ -0.12
SRRT-213ENST00000611405 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 TICAM2Q86XR7 235 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 FOXD4L4Q8WXT5 416 aaPredicted RBP14.3□□□□□ -0.12
SRRT-213ENST00000611405 PIGBQ92521 554 aa14.3□□□□□ -0.12
SRRT-213ENST00000611405 TOGARAM1Q9Y4F4 1720 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms