RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 ISCA1Q9BUE6 129 aa27.76■■■□□ 2.03
UBE3C-209ENST00000611269 USP42Q9H9J4 1324 aaKnown RBP27.75■■■□□ 2.03
UBE3C-209ENST00000611269 GPTP24298 496 aa27.74■■■□□ 2.03
UBE3C-209ENST00000611269 GCKRQ14397 625 aa27.74■■■□□ 2.03
UBE3C-209ENST00000611269 ZNF652Q9Y2D9 606 aa27.74■■■□□ 2.03
UBE3C-209ENST00000611269 BCL2L12Q9HB09 334 aa27.74■■■□□ 2.03
UBE3C-209ENST00000611269 SLC15A2Q16348 729 aa27.73■■■□□ 2.03
UBE3C-209ENST00000611269 CLEC4GQ6UXB4 293 aa27.73■■■□□ 2.03
UBE3C-209ENST00000611269 CCDC191Q8NCU4 936 aa27.72■■■□□ 2.03
UBE3C-209ENST00000611269 CWC25Q9NXE8 425 aaPredicted RBP27.72■■■□□ 2.03
UBE3C-209ENST00000611269 STK32BQ9NY57 414 aa27.72■■■□□ 2.03
UBE3C-209ENST00000611269 C9orf78Q9NZ63 289 aaPredicted RBP27.72■■■□□ 2.03
UBE3C-209ENST00000611269 IBTKQ9P2D0 1353 aaPredicted RBP27.72■■■□□ 2.03
UBE3C-209ENST00000611269 NBPF7P0C2Y1 421 aaPredicted RBP27.72■■■□□ 2.03
UBE3C-209ENST00000611269 TRIM28Q13263 835 aaKnown RBP27.72■■■□□ 2.03
UBE3C-209ENST00000611269 ZNF34Q8IZ26 560 aa27.72■■■□□ 2.03
UBE3C-209ENST00000611269 C1orf115Q9H7X2 142 aa27.72■■■□□ 2.03
UBE3C-209ENST00000611269 GRM8O00222 908 aa27.71■■■□□ 2.03
UBE3C-209ENST00000611269 RGL2O15211 777 aa27.71■■■□□ 2.03
UBE3C-209ENST00000611269 UBN2Q6ZU65 1347 aa27.7■■■□□ 2.03
UBE3C-209ENST00000611269 GNAI3P08754 354 aa27.7■■■□□ 2.03
UBE3C-209ENST00000611269 COL23A1Q86Y22 540 aaPredicted RBP27.7■■■□□ 2.03
UBE3C-209ENST00000611269 PNPLA7Q6ZV29 1317 aa27.7■■■□□ 2.02
UBE3C-209ENST00000611269 NLRP10Q86W26 655 aa27.7■■■□□ 2.02
UBE3C-209ENST00000611269 UBTFL1P0CB47 393 aaPredicted RBP27.69■■■□□ 2.02
UBE3C-209ENST00000611269 NIP7Q9Y221 180 aaKnown RBP eCLIP27.69■■■□□ 2.02
UBE3C-209ENST00000611269 FLAD1Q8NFF5 587 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 GCC1Q96CN9 775 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 QSER1Q2KHR3 1735 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 UTYO14607 1347 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 NUCB1Q02818 461 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 TBC1D9BQ66K14 1250 aa27.68■■■□□ 2.02
UBE3C-209ENST00000611269 JARID2Q92833 1246 aaPredicted RBP27.68■■■□□ 2.02
UBE3C-209ENST00000611269 UBE3BQ7Z3V4 1068 aa27.66■■■□□ 2.02
UBE3C-209ENST00000611269 GNAI2P04899 355 aa27.66■■■□□ 2.02
UBE3C-209ENST00000611269 GYS1P13807 737 aa27.66■■■□□ 2.02
UBE3C-209ENST00000611269 BICDL1Q6ZP65 573 aa27.66■■■□□ 2.02
UBE3C-209ENST00000611269 SIRT2Q8IXJ6 389 aa27.66■■■□□ 2.02
UBE3C-209ENST00000611269 RTL5Q5HYW3 569 aaPredicted RBP27.65■■■□□ 2.02
UBE3C-209ENST00000611269 LRRFIP2Q9Y608 721 aaKnown RBP27.65■■■□□ 2.02
UBE3C-209ENST00000611269 H7C1W4 665 aa27.64■■■□□ 2.01
UBE3C-209ENST00000611269 PARP10Q53GL7 1025 aa27.64■■■□□ 2.01
UBE3C-209ENST00000611269 SUSD4Q5VX71 490 aa27.64■■■□□ 2.01
UBE3C-209ENST00000611269 CASP7P55210 303 aa27.63■■■□□ 2.01
UBE3C-209ENST00000611269 NOP58Q9Y2X3 529 aaKnown RBP27.63■■■□□ 2.01
UBE3C-209ENST00000611269 FAM177BA6PVY3 158 aa27.62■■■□□ 2.01
UBE3C-209ENST00000611269 ZBTB38Q8NAP3 1195 aaPredicted RBP27.62■■■□□ 2.01
UBE3C-209ENST00000611269 FAM89AQ96GI7 184 aa27.61■■■□□ 2.01
UBE3C-209ENST00000611269 SUCLG2Q96I99 432 aa27.61■■■□□ 2.01
UBE3C-209ENST00000611269 SETDB2Q96T68 719 aa27.61■■■□□ 2.01
UBE3C-209ENST00000611269 TRMT112Q9UI30 125 aaKnown RBP27.61■■■□□ 2.01
UBE3C-209ENST00000611269 COL24A1Q17RW2 1714 aa27.61■■■□□ 2.01
UBE3C-209ENST00000611269 PCCAP05165 728 aaPredicted RBP27.61■■■□□ 2.01
UBE3C-209ENST00000611269 CHD1LQ86WJ1 897 aa27.61■■■□□ 2.01
UBE3C-209ENST00000611269 ZBTB47Q9UFB7 747 aaPredicted RBP27.61■■■□□ 2.01
UBE3C-209ENST00000611269 RPAP2Q8IXW5 612 aaPredicted RBP27.6■■■□□ 2.01
UBE3C-209ENST00000611269 NFIXQ14938 502 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 PPP1R42Q7Z4L9 355 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 SYNE4Q8N205 404 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 KAZALD1Q96I82 304 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 ANP32EQ9BTT0 268 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 UTP14AQ9BVJ6 771 aaKnown RBP27.59■■■□□ 2.01
UBE3C-209ENST00000611269 CEP85Q6P2H3 762 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 HDAC5Q9UQL6 1122 aa27.59■■■□□ 2.01
UBE3C-209ENST00000611269 NTSR2O95665 410 aa27.58■■■□□ 2.01
UBE3C-209ENST00000611269 ERICH6Q7L0X2 663 aa27.58■■■□□ 2.01
UBE3C-209ENST00000611269 ANKRD44Q8N8A2 993 aa27.58■■■□□ 2.01
UBE3C-209ENST00000611269 DDRGK1Q96HY6 314 aa27.57■■■□□ 2
UBE3C-209ENST00000611269 BICC1Q9H694 974 aaKnown RBP27.57■■■□□ 2
UBE3C-209ENST00000611269 EPHA10Q5JZY3 1008 aa27.56■■■□□ 2
UBE3C-209ENST00000611269 PDGFDQ9GZP0 370 aaPredicted RBP27.56■■■□□ 2
UBE3C-209ENST00000611269 CARMIL3Q8ND23 1372 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 SH3TC1Q8TE82 1336 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 CDHR2Q9BYE9 1310 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 TM4SF1P30408 202 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 NUTM1Q86Y26 1132 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 NLGN1Q8N2Q7 840 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 DCTPP1Q9H773 170 aa27.55■■■□□ 2
UBE3C-209ENST00000611269 NBPF5PQ86XG9 351 aaPredicted RBP27.54■■■□□ 2
UBE3C-209ENST00000611269 IRS4O14654 1257 aaPredicted RBP27.53■■■□□ 2
UBE3C-209ENST00000611269 ANKRD45Q5TZF3 282 aa27.53■■■□□ 2
UBE3C-209ENST00000611269 MSL1Q68DK7 614 aa27.53■■■□□ 2
UBE3C-209ENST00000611269 LNPKQ9C0E8 428 aa27.53■■■□□ 2
UBE3C-209ENST00000611269 NYXQ9GZU5 481 aa27.53■■■□□ 2
UBE3C-209ENST00000611269 FOXO4P98177 505 aa27.52■■■□□ 2
UBE3C-209ENST00000611269 ATP8B2P98198 1209 aa27.52■■■□□ 2
UBE3C-209ENST00000611269 PNMA6EA0A0J9YXQ4 647 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 DDR1Q08345 913 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 DDX60Q8IY21 1712 aaKnown RBP27.51■■□□□ 1.99
UBE3C-209ENST00000611269 SEC24BO95487 1268 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 ERFEQ4G0M1 354 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 TPTE2Q6XPS3 522 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 PLA2G12BQ9BX93 195 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 MYH3P11055 1940 aa27.51■■□□□ 1.99
UBE3C-209ENST00000611269 LAMB2P55268 1798 aa27.5■■□□□ 1.99
UBE3C-209ENST00000611269 HCLS1P14317 486 aaPredicted RBP27.5■■□□□ 1.99
UBE3C-209ENST00000611269 GTF2E1P29083 439 aaPredicted RBP27.5■■□□□ 1.99
UBE3C-209ENST00000611269 POLRMTO00411 1230 aaKnown RBP27.49■■□□□ 1.99
UBE3C-209ENST00000611269 MTX1Q13505 466 aa27.49■■□□□ 1.99
UBE3C-209ENST00000611269 RABL6Q3YEC7 729 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms