RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
CNTFR-204ENST00000610543 MRE11P49959 708 aa18.39■□□□□ 0.53
CNTFR-204ENST00000610543 MCTP1Q6DN14 999 aa18.39■□□□□ 0.53
CNTFR-204ENST00000610543 ATP5J2-PTCD1G3V325 749 aa18.39■□□□□ 0.53
CNTFR-204ENST00000610543 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
CNTFR-204ENST00000610543 NOL8Q76FK4 1167 aaKnown RBP18.39■□□□□ 0.53
CNTFR-204ENST00000610543 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
CNTFR-204ENST00000610543 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
CNTFR-204ENST00000610543 HSPA1LP34931 641 aa18.38■□□□□ 0.53
CNTFR-204ENST00000610543 PKP1Q13835 747 aa18.38■□□□□ 0.53
CNTFR-204ENST00000610543 KLHDC4Q8TBB5 520 aa18.38■□□□□ 0.53
CNTFR-204ENST00000610543 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
CNTFR-204ENST00000610543 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
CNTFR-204ENST00000610543 CCDC171Q6TFL3 1326 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 RFX5P48382 616 aaPredicted RBP18.37■□□□□ 0.53
CNTFR-204ENST00000610543 NBPF14Q5TI25 921 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
CNTFR-204ENST00000610543 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
CNTFR-204ENST00000610543 TLR7Q9NYK1 1049 aaKnown RBP18.37■□□□□ 0.53
CNTFR-204ENST00000610543 TJP1Q07157 1748 aa18.36■□□□□ 0.53
CNTFR-204ENST00000610543 CASP7P55210 303 aa18.36■□□□□ 0.53
CNTFR-204ENST00000610543 ARXQ96QS3 562 aa18.36■□□□□ 0.53
CNTFR-204ENST00000610543 ZKSCAN1P17029 563 aaPredicted RBP18.35■□□□□ 0.53
CNTFR-204ENST00000610543 TNNI3KQ59H18 835 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 BOLA2Q9H3K6 86 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
CNTFR-204ENST00000610543 FPGT-TNNI3KV9GXZ4 949 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 RFX7Q2KHR2 1363 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 TTC14Q96N46 770 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 TM6SF1Q9BZW5 370 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
CNTFR-204ENST00000610543 H7C1W4 665 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 BRD1O95696 1058 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
CNTFR-204ENST00000610543 ATP5JP18859 108 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
CNTFR-204ENST00000610543 KCNJ4P48050 445 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
CNTFR-204ENST00000610543 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
CNTFR-204ENST00000610543 GRPEL1Q9HAV7 217 aa18.34■□□□□ 0.53
CNTFR-204ENST00000610543 A1BGP04217 495 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 TFCP2Q12800 502 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 LMBR1LQ6UX01 489 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 KCNB2Q92953 911 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.53
CNTFR-204ENST00000610543 COL14A1Q05707 1796 aaKnown RBP18.33■□□□□ 0.53
CNTFR-204ENST00000610543 PTH1RQ03431 593 aa18.33■□□□□ 0.52
CNTFR-204ENST00000610543 RNF20Q5VTR2 975 aa18.33■□□□□ 0.52
CNTFR-204ENST00000610543 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
CNTFR-204ENST00000610543 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.52
CNTFR-204ENST00000610543 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
CNTFR-204ENST00000610543 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.52
CNTFR-204ENST00000610543 AK2P54819 239 aa18.32■□□□□ 0.52
CNTFR-204ENST00000610543 DBNLQ9UJU6 430 aaKnown RBP18.32■□□□□ 0.52
CNTFR-204ENST00000610543 CYP46A1Q9Y6A2 500 aa18.32■□□□□ 0.52
CNTFR-204ENST00000610543 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
CNTFR-204ENST00000610543 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
CNTFR-204ENST00000610543 FOXO4P98177 505 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
CNTFR-204ENST00000610543 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
CNTFR-204ENST00000610543 PSMA5P28066 241 aa18.3■□□□□ 0.52
CNTFR-204ENST00000610543 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
CNTFR-204ENST00000610543 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
CNTFR-204ENST00000610543 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
CNTFR-204ENST00000610543 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 JCADQ9P266 1359 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 LRP6O75581 1613 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
CNTFR-204ENST00000610543 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
CNTFR-204ENST00000610543 MBD3O95983 291 aa18.28■□□□□ 0.52
CNTFR-204ENST00000610543 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
CNTFR-204ENST00000610543 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
CNTFR-204ENST00000610543 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
CNTFR-204ENST00000610543 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
CNTFR-204ENST00000610543 HAUS7Q99871 368 aa18.27■□□□□ 0.52
CNTFR-204ENST00000610543 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.52
CNTFR-204ENST00000610543 ITGB4P16144 1822 aa18.27■□□□□ 0.52
CNTFR-204ENST00000610543 SOCS7O14512 581 aa18.27■□□□□ 0.51
CNTFR-204ENST00000610543 STARD3NLO95772 234 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms