RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	ATP10D	Q9P241	1426 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	ALDH1L1	O75891	902 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	PDIA6	Q15084	440 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	DDX46	Q7L014	1031 aa	Known RBP	11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	PLEKHM2	Q8IWE5	1019 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	ZGPAT	Q8N5A5	531 aa	Known RBP	11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	PIGB	Q92521	554 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	LMO7	Q8WWI1	1683 aa		11.9	□□□□□ -0.5
CTCFL-222	ENST00000609232	BMP2KL	Q5H9B9	411 aa		11.9	□□□□□ -0.51
CTCFL-222	ENST00000609232	FSD1	Q9BTV5	496 aa		11.9	□□□□□ -0.51
CTCFL-222	ENST00000609232	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	PKP1	Q13835	747 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	TTLL7	Q6ZT98	887 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	DNAJC10	Q8IXB1	793 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	ISY1	Q9ULR0	285 aa	Known RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	HSP90B1	P14625	803 aa	Known RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	GSPT1	P15170	499 aa	Known RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	CCDC82	Q8N4S0	544 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	HEG1	Q9ULI3	1381 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	FAM98C	Q17RN3	349 aa	Known RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	WASHC4	Q2M389	1173 aa		11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	CLASRP	Q8N2M8	674 aa	Known RBP	11.89	□□□□□ -0.51
CTCFL-222	ENST00000609232	VPS37C	A5D8V6	355 aa	Predicted RBP	11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	STARD3NL	O95772	234 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	PIBF1	Q8WXW3	757 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	SSFA2	P28290	1259 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	BBX	Q8WY36	941 aa	Predicted RBP	11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	METTL22	Q9BUU2	404 aa	Predicted RBP	11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	CDC45	O75419	566 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	MX1	P20591	662 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	HAND2	P61296	217 aa		11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	NKX1-1	Q15270	411 aa	Predicted RBP	11.88	□□□□□ -0.51
CTCFL-222	ENST00000609232	PLCD3	Q8N3E9	789 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	TRIM44	Q96DX7	344 aa	Predicted RBP	11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	DDX49	Q9Y6V7	483 aa	Known RBP	11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	LMBR1L	Q6UX01	489 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	CCDC129	Q6ZRS4	1044 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	SUCLG2	Q96I99	432 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	BICC1	Q9H694	974 aa	Known RBP	11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	NEURL1B	A8MQ27	555 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	NBPF26	B4DH59	902 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	RRP9	O43818	475 aa	Known RBP	11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	IGKV5-2	P06315	115 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	TTC22	Q5TAA0	569 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	NBPF14	Q5TI25	921 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	NBPF10	Q6P3W6	841 aa	Known RBP	11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	NBPF15	Q8N660	670 aa		11.87	□□□□□ -0.51
CTCFL-222	ENST00000609232	FAM208A	Q9UK61	1670 aa	Known RBP	11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	HSP90AB4P	Q58FF6	505 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	DDX11	Q96FC9	970 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	TLR7	Q9NYK1	1049 aa	Known RBP	11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	GCKR	Q14397	625 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	PRPF40B	Q6NWY9	871 aa	Known RBP	11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	KIF6	Q6ZMV9	814 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	NECAB1	Q8N987	351 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	ATG3	Q9NT62	314 aa		11.86	□□□□□ -0.51
CTCFL-222	ENST00000609232	PRPF40A	O75400	957 aa	Known RBP	11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	ABCC6	O95255	1503 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	PDE1A	P54750	535 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	PLBD2	Q8NHP8	589 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	RHPN1	Q8TCX5	695 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	SSH3	Q8TE77	659 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	NHSL1	Q5SYE7	1610 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	GUCY1B3	Q02153	619 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	KIF1BP	Q96EK5	621 aa		11.85	□□□□□ -0.51
CTCFL-222	ENST00000609232	SPATA31A1	Q5TZJ5	1347 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	HCLS1	P14317	486 aa	Predicted RBP	11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	LTBP4	Q8N2S1	1624 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	RAD21	O60216	631 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	ATP2B1	P20020	1258 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	RAB11FIP3	O75154	756 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	FAM173B	Q6P4H8	233 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	TBC1D32	Q96NH3	1257 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	SEC62	Q99442	399 aa	Known RBP	11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	PANK2	Q9BZ23	570 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	PALD1	Q9ULE6	856 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	KDM3B	Q7LBC6	1761 aa		11.84	□□□□□ -0.51
CTCFL-222	ENST00000609232	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.83	□□□□□ -0.51
CTCFL-222	ENST00000609232	XRCC6	P12956	609 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	RRP12	Q5JTH9	1297 aa	Known RBP	11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	CWC25	Q9NXE8	425 aa	Predicted RBP	11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	CAVIN1	Q6NZI2	390 aa	Known RBP	11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	PI16	Q6UXB8	463 aa		11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	USP21	Q9UK80	565 aa		11.83	□□□□□ -0.52
CTCFL-222	ENST00000609232	FAM227B	Q96M60	508 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	PXDNL	A1KZ92	1463 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	CRYBG1	Q9Y4K1	1723 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	GOLIM4	O00461	696 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	FIBP	O43427	364 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	ATP6V1A	P38606	617 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	CCDC144CP	Q8IYA2	1237 aa		11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	RBM27	Q9P2N5	1060 aa	Known RBP	11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.82	□□□□□ -0.52
CTCFL-222	ENST00000609232	CACNA1F	O60840	1977 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	EPHA10	Q5JZY3	1008 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms