RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 ANKRD13DQ6ZTN6 518 aa21.76■■□□□ 1.07
PRDM16-209ENST00000606170 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
PRDM16-209ENST00000606170 ZNF428Q96B54 188 aa21.76■■□□□ 1.07
PRDM16-209ENST00000606170 RRAGCQ9HB90 399 aa21.76■■□□□ 1.07
PRDM16-209ENST00000606170 ARFGEF2Q9Y6D5 1785 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 TOMM70O94826 608 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 NLRP10Q86W26 655 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
PRDM16-209ENST00000606170 PLBD2Q8NHP8 589 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 TSR2Q969E8 191 aaKnown RBP21.75■■□□□ 1.07
PRDM16-209ENST00000606170 NLRP3Q96P20 1036 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
PRDM16-209ENST00000606170 LTBP3Q9NS15 1303 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 FER1L6Q2WGJ9 1857 aa21.75■■□□□ 1.07
PRDM16-209ENST00000606170 RIC1Q4ADV7 1423 aa21.74■■□□□ 1.07
PRDM16-209ENST00000606170 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
PRDM16-209ENST00000606170 C3orf67Q6ZVT6 689 aa21.74■■□□□ 1.07
PRDM16-209ENST00000606170 TRMT112Q9UI30 125 aaKnown RBP21.74■■□□□ 1.07
PRDM16-209ENST00000606170 CCDC88AQ3V6T2 1871 aa21.73■■□□□ 1.07
PRDM16-209ENST00000606170 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
PRDM16-209ENST00000606170 FKBP4Q02790 459 aaKnown RBP eCLIP21.72■■□□□ 1.07
PRDM16-209ENST00000606170 RTKN2Q8IZC4 609 aa21.72■■□□□ 1.07
PRDM16-209ENST00000606170 FAM9BQ8IZU0 186 aa21.72■■□□□ 1.07
PRDM16-209ENST00000606170 TIAM2Q8IVF5 1701 aa21.72■■□□□ 1.07
PRDM16-209ENST00000606170 ATP5J2-PTCD1G3V325 749 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
PRDM16-209ENST00000606170 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
PRDM16-209ENST00000606170 HOXA10P31260 410 aaPredicted RBP21.71■■□□□ 1.07
PRDM16-209ENST00000606170 SLC10A5Q5PT55 438 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 DPY19L2Q6NUT2 758 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 RIC3Q7Z5B4 369 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 SYNE4Q8N205 404 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 TSPYL6Q8N831 410 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 PHAXQ9H814 394 aaKnown RBP21.71■■□□□ 1.07
PRDM16-209ENST00000606170 RNF123Q5XPI4 1314 aa21.71■■□□□ 1.07
PRDM16-209ENST00000606170 ANKRD36CQ5JPF3 1778 aa21.7■■□□□ 1.06
PRDM16-209ENST00000606170 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
PRDM16-209ENST00000606170 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
PRDM16-209ENST00000606170 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
PRDM16-209ENST00000606170 SH3TC1Q8TE82 1336 aa21.7■■□□□ 1.06
PRDM16-209ENST00000606170 CRAMP1Q96RY5 1269 aa21.69■■□□□ 1.06
PRDM16-209ENST00000606170 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
PRDM16-209ENST00000606170 PPEF1O14829 653 aaPredicted RBP21.68■■□□□ 1.06
PRDM16-209ENST00000606170 HSPA6P17066 643 aa21.68■■□□□ 1.06
PRDM16-209ENST00000606170 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
PRDM16-209ENST00000606170 ISCA1Q9BUE6 129 aa21.68■■□□□ 1.06
PRDM16-209ENST00000606170 VEGFAP15692 232 aaPredicted RBP21.67■■□□□ 1.06
PRDM16-209ENST00000606170 IL16Q14005 1332 aa21.66■■□□□ 1.06
PRDM16-209ENST00000606170 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
PRDM16-209ENST00000606170 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
PRDM16-209ENST00000606170 CC2D2BQ6DHV5 1058 aa21.66■■□□□ 1.06
PRDM16-209ENST00000606170 RBM46Q8TBY0 533 aaKnown RBP21.66■■□□□ 1.06
PRDM16-209ENST00000606170 FAM89AQ96GI7 184 aa21.66■■□□□ 1.06
PRDM16-209ENST00000606170 ABCC4O15439 1325 aa21.65■■□□□ 1.06
PRDM16-209ENST00000606170 DDNO94850 711 aaPredicted RBP21.65■■□□□ 1.06
PRDM16-209ENST00000606170 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
PRDM16-209ENST00000606170 SLC51AQ86UW1 340 aa21.65■■□□□ 1.06
PRDM16-209ENST00000606170 MYD88Q99836 296 aa21.65■■□□□ 1.06
PRDM16-209ENST00000606170 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
PRDM16-209ENST00000606170 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
PRDM16-209ENST00000606170 DDX58O95786 925 aaKnown RBP21.64■■□□□ 1.05
PRDM16-209ENST00000606170 PSMD1Q99460 953 aa21.64■■□□□ 1.05
PRDM16-209ENST00000606170 STK31Q9BXU1 1019 aa21.64■■□□□ 1.05
PRDM16-209ENST00000606170 DDX46Q7L014 1031 aaKnown RBP21.63■■□□□ 1.05
PRDM16-209ENST00000606170 WDR63Q8IWG1 891 aa21.63■■□□□ 1.05
PRDM16-209ENST00000606170 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
PRDM16-209ENST00000606170 TRIM28Q13263 835 aaKnown RBP21.62■■□□□ 1.05
PRDM16-209ENST00000606170 GRIPAP1Q4V328 841 aa21.62■■□□□ 1.05
PRDM16-209ENST00000606170 SNED1Q8TER0 1413 aa21.62■■□□□ 1.05
PRDM16-209ENST00000606170 CEP350Q5VT06 3117 aa21.62■■□□□ 1.05
PRDM16-209ENST00000606170 POTECB2RU33 542 aa21.61■■□□□ 1.05
PRDM16-209ENST00000606170 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
PRDM16-209ENST00000606170 IRS4O14654 1257 aaPredicted RBP21.6■■□□□ 1.05
PRDM16-209ENST00000606170 BBOX1O75936 387 aa21.6■■□□□ 1.05
PRDM16-209ENST00000606170 FSTL1Q12841 308 aa21.6■■□□□ 1.05
PRDM16-209ENST00000606170 JDP2Q8WYK2 163 aa21.6■■□□□ 1.05
PRDM16-209ENST00000606170 MAP3K2Q9Y2U5 619 aa21.6■■□□□ 1.05
PRDM16-209ENST00000606170 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
PRDM16-209ENST00000606170 SLC4A2P04920 1241 aa21.59■■□□□ 1.05
PRDM16-209ENST00000606170 GRAPQ13588 217 aa21.59■■□□□ 1.05
PRDM16-209ENST00000606170 ZBTB38Q8NAP3 1195 aaPredicted RBP21.59■■□□□ 1.05
PRDM16-209ENST00000606170 SMC1BQ8NDV3 1235 aa21.59■■□□□ 1.05
PRDM16-209ENST00000606170 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
PRDM16-209ENST00000606170 METTL22Q9BUU2 404 aaPredicted RBP21.59■■□□□ 1.05
PRDM16-209ENST00000606170 LAMB2P55268 1798 aa21.59■■□□□ 1.05
PRDM16-209ENST00000606170 WDR90Q96KV7 1748 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 KSR2Q6VAB6 950 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 CCDC191Q8NCU4 936 aa21.58■■□□□ 1.05
PRDM16-209ENST00000606170 FZD9O00144 591 aa21.57■■□□□ 1.04
PRDM16-209ENST00000606170 APLP1P51693 650 aa21.57■■□□□ 1.04
PRDM16-209ENST00000606170 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PRDM16-209ENST00000606170 SF3B3Q15393 1217 aaKnown RBP21.57■■□□□ 1.04
PRDM16-209ENST00000606170 G2E3Q7L622 706 aa21.57■■□□□ 1.04
PRDM16-209ENST00000606170 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
PRDM16-209ENST00000606170 SPINK5Q9NQ38 1064 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms