RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 C10orf71Q711Q0 1435 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 CARMIL3Q8ND23 1372 aa9.1□□□□□ -0.95
LINC00458-204ENST00000606055 MYH3P11055 1940 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 UTYO14607 1347 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 POLRMTO00411 1230 aaKnown RBP9.09□□□□□ -0.95
LINC00458-204ENST00000606055 DDR1Q08345 913 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 BEND3Q5T5X7 828 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 TBC1D9BQ66K14 1250 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 TTLL7Q6ZT98 887 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
LINC00458-204ENST00000606055 NLGN2Q8NFZ4 835 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 SETDB2Q96T68 719 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 MAP3K2Q9Y2U5 619 aa9.09□□□□□ -0.95
LINC00458-204ENST00000606055 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
LINC00458-204ENST00000606055 SERPINB2P05120 415 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 TGFB2P61812 414 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 GPR162Q16538 588 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 FTSJ3Q8IY81 847 aaKnown RBP9.08□□□□□ -0.96
LINC00458-204ENST00000606055 BCL2L13Q9BXK5 485 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 NYXQ9GZU5 481 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 LAMB2P55268 1798 aa9.08□□□□□ -0.96
LINC00458-204ENST00000606055 SBF1O95248 1867 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 NEURL1BA8MQ27 555 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 ANXA1P04083 346 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 GNAI3P08754 354 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 ST5P78524 1137 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 AIMP1Q12904 312 aaKnown RBP9.07□□□□□ -0.96
LINC00458-204ENST00000606055 GCKRQ14397 625 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 MVPQ14764 893 aaKnown RBP9.07□□□□□ -0.96
LINC00458-204ENST00000606055 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
LINC00458-204ENST00000606055 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
LINC00458-204ENST00000606055 NIP7Q9Y221 180 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00458-204ENST00000606055 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 H7C1W4 665 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 PCCAP05165 728 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-204ENST00000606055 HLFQ16534 295 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 SLC10A5Q5PT55 438 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 TPTE2Q6XPS3 522 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 NLRP10Q86W26 655 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 NBPF5PQ86XG9 351 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-204ENST00000606055 CNBD1Q8NA66 436 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 ZBTB38Q8NAP3 1195 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-204ENST00000606055 FRAT1Q92837 279 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-204ENST00000606055 PLA2G12BQ9BX93 195 aa9.06□□□□□ -0.96
LINC00458-204ENST00000606055 DICER1Q9UPY3 1922 aaKnown RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
LINC00458-204ENST00000606055 GRM8O00222 908 aa9.05□□□□□ -0.96
LINC00458-204ENST00000606055 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 PRR5LQ6MZQ0 368 aa9.05□□□□□ -0.96
LINC00458-204ENST00000606055 UTP14AQ9BVJ6 771 aaKnown RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
LINC00458-204ENST00000606055 DDX60Q8IY21 1712 aaKnown RBP9.05□□□□□ -0.96
LINC00458-204ENST00000606055 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
LINC00458-204ENST00000606055 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
LINC00458-204ENST00000606055 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 KLRG2A4D1S0 409 aaPredicted RBP9.04□□□□□ -0.96
LINC00458-204ENST00000606055 F6X3S4 739 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 NTSR2O95665 410 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 RLBP1P12271 317 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 DPEP1P16444 411 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 PDE6BP35913 854 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 CASP7P55210 303 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 MTX1Q13505 466 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 MYD88Q99836 296 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 ZBTB40Q9NUA8 1239 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 WWC3Q9ULE0 1092 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 TAF1P21675 1872 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 FER1L6Q2WGJ9 1857 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 UBN2Q6ZU65 1347 aa9.04□□□□□ -0.96
LINC00458-204ENST00000606055 H0YIN7 160 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 GPTP24298 496 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 SLC4A10Q6U841 1118 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
LINC00458-204ENST00000606055 BRIP1Q9BX63 1249 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 PIM2Q9P1W9 311 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
LINC00458-204ENST00000606055 UBTFL1P0CB47 393 aaPredicted RBP9.02□□□□□ -0.97
LINC00458-204ENST00000606055 YBX3P16989 372 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC00458-204ENST00000606055 CHRNA5P30532 468 aa9.02□□□□□ -0.97
LINC00458-204ENST00000606055 C1QTNF8P60827 252 aa9.02□□□□□ -0.97
LINC00458-204ENST00000606055 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
LINC00458-204ENST00000606055 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
LINC00458-204ENST00000606055 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
LINC00458-204ENST00000606055 C9orf78Q9NZ63 289 aaPredicted RBP9.02□□□□□ -0.97
LINC00458-204ENST00000606055 SPEF2Q9C093 1822 aa9.02□□□□□ -0.97
LINC00458-204ENST00000606055 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms