RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
FOCAD-214ENST00000604828 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
FOCAD-214ENST00000604828 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
FOCAD-214ENST00000604828 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
FOCAD-214ENST00000604828 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
FOCAD-214ENST00000604828 TNS1Q9HBL0 1735 aaKnown RBP12.36□□□□□ -0.43
FOCAD-214ENST00000604828 KCNQ3O43525 872 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
FOCAD-214ENST00000604828 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
FOCAD-214ENST00000604828 LSG1Q9H089 658 aaKnown RBP12.36□□□□□ -0.43
FOCAD-214ENST00000604828 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
FOCAD-214ENST00000604828 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
FOCAD-214ENST00000604828 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
FOCAD-214ENST00000604828 KSR2Q6VAB6 950 aa12.35□□□□□ -0.43
FOCAD-214ENST00000604828 IL25Q9H293 177 aa12.35□□□□□ -0.43
FOCAD-214ENST00000604828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
FOCAD-214ENST00000604828 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
FOCAD-214ENST00000604828 UTYO14607 1347 aa12.35□□□□□ -0.43
FOCAD-214ENST00000604828 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
FOCAD-214ENST00000604828 APBA3O96018 575 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
FOCAD-214ENST00000604828 EN1Q05925 392 aaPredicted RBP12.34□□□□□ -0.43
FOCAD-214ENST00000604828 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
FOCAD-214ENST00000604828 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 HYPKQ9NX55 129 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 RUFY2Q8WXA3 655 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 TTC14Q96N46 770 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
FOCAD-214ENST00000604828 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
FOCAD-214ENST00000604828 MRC1P22897 1456 aa12.33□□□□□ -0.44
FOCAD-214ENST00000604828 PHKG2P15735 406 aa12.33□□□□□ -0.44
FOCAD-214ENST00000604828 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
FOCAD-214ENST00000604828 KCNB2Q92953 911 aa12.33□□□□□ -0.44
FOCAD-214ENST00000604828 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
FOCAD-214ENST00000604828 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
FOCAD-214ENST00000604828 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 TMEM63CQ9P1W3 806 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 RPAP1Q9BWH6 1393 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 BAG6P46379 1132 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-214ENST00000604828 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
FOCAD-214ENST00000604828 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
FOCAD-214ENST00000604828 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
FOCAD-214ENST00000604828 C5P01031 1676 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 ANXA1P04083 346 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
FOCAD-214ENST00000604828 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
FOCAD-214ENST00000604828 LIMCH1Q9UPQ0 1083 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 GRM8O00222 908 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 HIP1O00291 1037 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 MAP4K4O95819 1239 aaPredicted RBP12.3□□□□□ -0.44
FOCAD-214ENST00000604828 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
FOCAD-214ENST00000604828 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
FOCAD-214ENST00000604828 PHF14O94880 888 aa12.29□□□□□ -0.44
FOCAD-214ENST00000604828 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 AK2P54819 239 aa12.29□□□□□ -0.44
FOCAD-214ENST00000604828 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
FOCAD-214ENST00000604828 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 BTAF1O14981 1849 aa12.29□□□□□ -0.44
FOCAD-214ENST00000604828 CWC27Q6UX04 472 aaKnown RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 PROM2Q8N271 834 aa12.29□□□□□ -0.44
FOCAD-214ENST00000604828 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
FOCAD-214ENST00000604828 SYCE3A1L190 88 aa12.28□□□□□ -0.44
FOCAD-214ENST00000604828 PDIA6Q15084 440 aa12.28□□□□□ -0.44
FOCAD-214ENST00000604828 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
FOCAD-214ENST00000604828 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
FOCAD-214ENST00000604828 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms