RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 TOMM20Q15388 145 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 ZNF394Q53GI3 561 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 ODR4Q5SWX8 454 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 ADGBQ8N7X0 1667 aa8.47□□□□□ -1.05
TUBE1-207ENST00000604689 CDC42BPAQ5VT25 1732 aa8.46□□□□□ -1.05
TUBE1-207ENST00000604689 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.05
TUBE1-207ENST00000604689 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.05
TUBE1-207ENST00000604689 CENPOQ9BU64 300 aa8.46□□□□□ -1.05
TUBE1-207ENST00000604689 ITM2BQ9Y287 266 aa8.46□□□□□ -1.05
TUBE1-207ENST00000604689 UACAQ9BZF9 1416 aa8.46□□□□□ -1.05
TUBE1-207ENST00000604689 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
TUBE1-207ENST00000604689 RSPH1Q8WYR4 309 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 CCDC85AQ96PX6 553 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-207ENST00000604689 MPHOSPH9Q99550 1183 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.06
TUBE1-207ENST00000604689 DONSONQ9NYP3 566 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 KIF14Q15058 1648 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 PTPN23Q9H3S7 1636 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 OATP04181 439 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 MAP9Q49MG5 647 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 FAM184AQ8NB25 1140 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-207ENST00000604689 SLC26A8Q96RN1 970 aa8.46□□□□□ -1.06
TUBE1-207ENST00000604689 PPP1R12AO14974 1030 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 RNF187Q5TA31 235 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 CDC37L1Q7L3B6 337 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 KIF2CQ99661 725 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 CALCOCO1Q9P1Z2 691 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 CDC42BPBQ9Y5S2 1711 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 FHOD3Q2V2M9 1422 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 EAPPQ56P03 285 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 ERCC4Q92889 916 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 MROH1Q8NDA8 1641 aa8.45□□□□□ -1.06
TUBE1-207ENST00000604689 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-207ENST00000604689 C10orf62Q5T681 223 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 TTC19Q6DKK2 380 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 DDX56Q9NY93 547 aaKnown RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 RAPGEF6Q8TEU7 1601 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
TUBE1-207ENST00000604689 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 USP19O94966 1318 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 PRIMPOLQ96LW4 560 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 KANSL2Q9H9L4 492 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 SEPT3Q9UH03 358 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 ADAMTSL3P82987 1691 aa8.44□□□□□ -1.06
TUBE1-207ENST00000604689 NBPF7P0C2Y1 421 aaPredicted RBP8.43□□□□□ -1.06
TUBE1-207ENST00000604689 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 DZIP1Q86YF9 867 aaKnown RBP8.43□□□□□ -1.06
TUBE1-207ENST00000604689 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 COMMD10Q9Y6G5 202 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 HMMRO75330 724 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 P4HBP07237 508 aaKnown RBP8.43□□□□□ -1.06
TUBE1-207ENST00000604689 NAIPQ13075 1403 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 KIF1CO43896 1103 aaKnown RBP8.43□□□□□ -1.06
TUBE1-207ENST00000604689 VAMP1P23763 118 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 SH3BGRP55822 239 aaPredicted RBP8.43□□□□□ -1.06
TUBE1-207ENST00000604689 FAM69CQ0P6D2 419 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 NFXL1Q6ZNB6 911 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 IER2Q9BTL4 223 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 IP6K2Q9UHH9 426 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 TCEAL9Q9UHQ7 104 aa8.43□□□□□ -1.06
TUBE1-207ENST00000604689 PDE3BQ13370 1112 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 AMOTL1Q8IY63 956 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 HLA-CQ95604 372 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 ZNF232Q9UNY5 417 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 KDM2BQ8NHM5 1336 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 KIF5CO60282 957 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 IGHDP01880 384 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 MAPK8P45983 427 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 CCDC15Q0P6D6 951 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 SYCP2LQ5T4T6 812 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 ICE2Q659A1 982 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 OSBPL2Q9H1P3 480 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
TUBE1-207ENST00000604689 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 MAP3K7O43318 606 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 TRIM29Q14134 588 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 MRPL58Q14197 206 aaKnown RBP8.42□□□□□ -1.06
TUBE1-207ENST00000604689 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
TUBE1-207ENST00000604689 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 AP1ARQ63HQ0 302 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 USP17L2Q6R6M4 530 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 JARID2Q92833 1246 aaPredicted RBP8.42□□□□□ -1.06
TUBE1-207ENST00000604689 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
TUBE1-207ENST00000604689 RSPH9Q9H1X1 276 aaPredicted RBP8.42□□□□□ -1.06
TUBE1-207ENST00000604689 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms